myRT

myRT report for GCA_900149785.2_Phormidium_lacuna

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Seq: FSSI02000066.1 (21721 bp)
Overview 1 RT 1: 17545-21355 bp Neighborhood of RT #1 [17545, 21355] RVT-CRISPR cas1 Cas2_I_II_III Feature: gene Location: 17545-17913 bp Feature: gene Location: 18099-18335 bp Feature: gene Location: 18713-20710 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 18905-19508 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 8905-1 9508 bp Feature: domain Description: cas1 Location: 19712-20681 bp Feature: domain Description: cas1 Location: 1 971 2-20681 bp Feature: gene Location: 20731-21015 bp Feature: domain Description: Cas2_I_II_III Location: 20746-20974 bp Feature: domain Description: Cas2_I_II_III Location: 20746-20974 bp Feature: gene Location: 21026-21355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, cas1 (TIGR00287), Cas2_I_II_III (cl11442)

Seq: FSSI02000016.1 (90328 bp)
Overview 1 RT 1: 44638-48087 bp 2 RT 2: 74454-81667 bp Neighborhood of RT #1 [44638, 48095] AlbA_2 TPR TPR RVT-Retrons HicB Neighborhood of RT #2 [74454, 81696] RVT-UG7 PRK07390 PRK07363 Feature: gene Location: 44638-45717 bp Feature: domain Description: AlbA_2 Location: 44707-45127 bp Feature: domain Description: AlbA_2 Location: 44707-4512 7 bp Feature: domain Description: TPR Location: 45292-45427 bp Feature: domain Description: TPR Location: 452 92 -4542 7 bp Feature: domain Description: TPR Location: 45481-45706 bp Feature: domain Description: TPR Location: 45481-45706 bp Feature: gene Location: 45926-46054 bp Feature: gene Location: 46253-47290 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46430-47036 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46430-47036 bp Feature: gene Location: 47408-47590 bp Feature: gene Location: 47889-48095 bp Feature: domain Description: HicB Location: 47892-48087 bp Feature: domain Description: HicB Location: 47892 -48087 bp Feature: gene Location: 74454-74627 bp Feature: gene Location: 74640-74888 bp Feature: gene Location: 75096-76640 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 75471-75891 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 75471-75891 bp Feature: gene Location: 77990-79834 bp Feature: domain Description: PRK07390 Location: 77993-79817 bp Feature: domain Description: PRK07390 Location: 77993-79817 bp Feature: gene Location: 80209-81696 bp Feature: domain Description: PRK07363 Location: 80212-81667 bp Feature: domain Description: PRK07363 Location: 802 12 -81667 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AlbA_2 (pfam04326), TPR (smart00028), RVT-Retrons, HicB (pfam05534), RVT-UG7, PRK07390 (NAD(P)H-quinone oxidoreductase subunit F; Validated), PRK07363 (NADH-quinone oxidoreductase subunit M)