myRT

myRT report for GCA_900156645.1_IMG-taxon_2681813511_annotated_assembly

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Seq: FTOC01000001.1 (633841 bp)
Overview 1 RT 1: 41-3975 bp Neighborhood of RT #1 [41, 4013] RVT-GII PRK13927 PRK13922 Feature: gene Location: 41-1843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 335-1028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 335-1 028 bp Feature: gene Location: 2043-3128 bp Feature: domain Description: PRK13927 Location: 2106-3093 bp Feature: domain Description: PRK1 3927 Location: 21 06-3093 bp Feature: gene Location: 3138-4013 bp Feature: domain Description: PRK13922 Location: 3141-3975 bp Feature: domain Description: PRK1 3922 Location: 31 41 -3975 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK13927 (rod shape-determining protein MreB; Provisional), PRK13922 (rod shape-determining protein MreC; Provisional)

Seq: FTOC01000020.1 (20756 bp)
Overview 1 RT 1: 70-4784 bp Neighborhood of RT #1 [70, 4810] RVT-UNC rumA Feature: gene Location: 70-1062 bp Feature: gene Location: 1162-2712 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1555-2005 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1555-2 005 bp Feature: gene Location: 2762-2941 bp Feature: gene Location: 3434-4810 bp Feature: domain Description: rumA Location: 3497-4784 bp Feature: domain Description: rumA Location: 3497-4784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK/RVT-UG12/RVT-UG15/RVT-UG14(RVT-UNC), rumA (TIGR00479)

Seq: FTOC01000003.1 (367708 bp)
Overview 1 RT 1: 42382-47869 bp Neighborhood of RT #1 [42382, 47898] betA GbsR RVT-GII group_II_RT_mat MFS_MdtG_SLC18_like Feature: gene Location: 42382-44067 bp Feature: domain Description: betA Location: 42400-43999 bp Feature: domain Description: betA Location: 42400-43 999 bp Feature: gene Location: 44196-44744 bp Feature: domain Description: GbsR Location: 44220-44736 bp Feature: domain Description: GbsR Location: 44220-4473 6 bp Feature: gene Location: 45207-45929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45528-45906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45528-45906 bp Feature: gene Location: 46042-46596 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 46048-46393 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 46048-463 93 bp Feature: gene Location: 46753-47898 bp Feature: domain Description: MFS_MdtG_SLC18_like Location: 46798-47869 bp Feature: domain Description: MFS_MdtG_SLC18_like Location: 46798-47869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT betA (TIGR01810), GbsR (COG1510), RVT-GII, group_II_RT_mat (TIGR04416), MFS_MdtG_SLC18_like (cd17325)

Seq: FTOC01000007.1 (164477 bp)
Overview 1 RT 1: 304-3626 bp Neighborhood of RT #1 [304, 3626] RVT-GII Intron_maturas2 HNHc PRK00024 Feature: gene Location: 304-2187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 568-1408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 568-14 08 bp Feature: domain Description: Intron_maturas2 Location: 1573-1777 bp Feature: domain Description: Intron_maturas2 Location: 1573-1777 bp Feature: domain Description: HNHc Note: nucleases Location: 1978-2131 bp Feature: domain Description: HNHc Note: nucleases Location: 1978-2131 bp Feature: gene Location: 2739-3293 bp Feature: domain Description: PRK00024 Location: 2763-3276 bp Feature: domain Description: PRK00024 Location: 2763-3276 bp Feature: gene Location: 3411-3626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK00024 (DNA repair protein RadC)