myRT

myRT report for GCA_900156765.1_IMG-taxon_2681813554_annotated_assembly

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Seq: FTOR01000003.1 (709176 bp)
Overview 1 RT 1: 97322-102175 bp Neighborhood of RT #1 [97322, 102309] RVT-GII GIIM SusD Feature: gene Location: 97322-98854 bp Feature: gene Location: 98941-99168 bp Feature: gene Location: 99202-100278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99424-100084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99424-1 00084 bp Feature: domain Description: GIIM Note: maturase Location: 100165-100276 bp Feature: domain Description: GIIM Note: maturase Location: 1 001 65-1 00276 bp Feature: gene Location: 100294-100581 bp Feature: gene Location: 100816-102309 bp Feature: domain Description: SusD Location: 100966-102175 bp Feature: domain Description: SusD Location: 1 00966-1 021 75 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), SusD (NF033071)

Seq: FTOR01000001.1 (1906449 bp)
Overview 1 RT 1: 180845-186430 bp 2 RT 2: 1392411-1399499 bp Neighborhood of RT #1 [180845, 186430] MPP_MS158 KOG4691 RVT-Retrons Neighborhood of RT #2 [1392411, 1399499] tolB DAP2 RVT-GII GIIM rho Feature: gene Location: 180845-182035 bp Feature: gene Location: 182142-182909 bp Feature: domain Description: MPP_MS158 Location: 182151-182847 bp Feature: domain Description: MPP_MS158 Location: 182 151-182 847 bp Feature: gene Location: 182913-184436 bp Feature: domain Description: KOG4691 Location: 183057-183276 bp Feature: domain Description: KOG4691 Location: 183057-1832 76 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 183462-184074 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 183462 -184074 bp Feature: gene Location: 184489-184617 bp Feature: gene Location: 184766-186430 bp Feature: gene Location: 1392411-1393052 bp Feature: gene Location: 1393130-1395559 bp Feature: domain Description: tolB Location: 1393448-1393556 bp Feature: domain Description: tolB Location: 1393448-1393556 bp Feature: domain Description: DAP2 Location: 1393565-1395548 bp Feature: domain Description: DAP2 Location: 1393565-1395548 bp Feature: gene Location: 1395660-1397063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1395996-1396614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1395996-1396614 bp Feature: domain Description: GIIM Note: maturase Location: 1396665-1396887 bp Feature: domain Description: GIIM Note: maturase Location: 1396665-1396887 bp Feature: gene Location: 1397547-1399307 bp Feature: domain Description: rho Location: 1397556-1399302 bp Feature: domain Description: rho Location: 1397556-1399302 bp Feature: gene Location: 1399317-1399499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MPP_MS158 (cd07404), KOG4691 (KOG4691, Uncharacterized conserved protein ), RVT-Retrons, tolB (PRK05137), DAP2 (COG1506), RVT-GII, GIIM (pfam08388), rho (TIGR00767)

Seq: FTOR01000015.1 (128106 bp)
Overview 1 RT 1: 86983-92513 bp Neighborhood of RT #1 [86983, 92513] Crp RVT-UG12 PRK13342 COG4916 Feature: gene Location: 86983-87177 bp Feature: gene Location: 87248-87892 bp Feature: domain Description: Crp Location: 87293-87851 bp Feature: domain Description: Crp Location: 87293 -87851 bp Feature: gene Location: 88260-89936 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 88632-89067 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 8863 2-89067 bp Feature: gene Location: 90469-91983 bp Feature: domain Description: PRK13342 Location: 90586-91156 bp Feature: domain Description: PRK13 3 42 Location: 90586-91156 bp Feature: domain Description: COG4916 Location: 91192-91936 bp Feature: domain Description: COG4916 Location: 91192-9193 6 bp Feature: gene Location: 92115-92513 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Crp (pfam00325), RVT-UG12, PRK13342 (recombination factor protein RarA; Reviewed), COG4916 (Uncharacterized protein )