myRT

myRT report for GCA_900156825.1_IMG-taxon_2681813561_annotated_assembly

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Seq: FTOV01000006.1 Chryseobacterium gambrini strain DSM 18014 genome assembly, contig: Ga0111674_106, whole genome shotgun sequence (284682 bp)
Overview 1 RT 1: 194419-201000 bp Neighborhood of RT #1 [194419, 201083] RVT-UG28b VirE_N PriCT_2 PTZ00398 PTZ00398 Feature: gene Location: 194419-194997 bp Feature: gene Location: 195031-195435 bp Feature: gene Location: 195527-197281 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 196001-196703 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 1 96001 -1 96703 bp Feature: gene Location: 197393-198424 bp Feature: domain Description: VirE_N Location: 197573-197945 bp Feature: domain Description: VirE_N Location: 1 97573-1 97945 bp Feature: domain Description: PriCT_2 Location: 198125-198278 bp Feature: domain Description: PriCT_2 Location: 1 981 25-1 98278 bp Feature: gene Location: 198549-201083 bp Feature: domain Description: PTZ00398 Location: 198573-199455 bp Feature: domain Description: PTZ00398 Location: 1 98573-1 99455 bp Feature: domain Description: PTZ00398 Location: 199485-201000 bp Feature: domain Description: PTZ00398 Location: 1 99485-201 000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28b, VirE_N (pfam08800), PriCT_2 (pfam08707), PTZ00398 (phosphoenolpyruvate carboxylase; Provisional)

Seq: FTOV01000003.1 Chryseobacterium gambrini strain DSM 18014 genome assembly, contig: Ga0111674_103, whole genome shotgun sequence (567905 bp)
Overview 1 RT 1: 100389-108264 bp Neighborhood of RT #1 [100389, 108264] DUF3127 RVT-Retrons WGR_DNA_ligase Feature: gene Location: 100389-100766 bp Feature: domain Description: DUF3127 Location: 100395-100653 bp Feature: domain Description: DUF312 7 Location: 100395-100653 bp Feature: gene Location: 101001-101279 bp Feature: gene Location: 101730-103244 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 102273-102891 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 102 2 73-102 891 bp Feature: gene Location: 103291-106623 bp Feature: domain Description: WGR_DNA_ligase Location: 103306-103525 bp Feature: domain Description: WGR_DNA_ligase Location: 103306-10352 5 bp Feature: gene Location: 106627-108264 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3127 (pfam11325), RVT-Retrons, WGR_DNA_ligase (cd07998)