myRT

myRT report for GCA_900157215.1_Strain_3-3

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Seq: FUFB01000026.1 (1012 bp)
Overview 1 RT 1: 271-604 bp Neighborhood of RT #1 [271, 861] RVT-GII Feature: gene Location: 271-861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 403-604 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FUFB01000037.1 (2410 bp)
Overview 1 RT 1: 218-1909 bp Neighborhood of RT #1 [218, 2310] RVT_N RVT-GII GIIM Feature: gene Location: 218-397 bp Feature: gene Location: 625-2310 bp Feature: domain Description: RVT_N Location: 691-934 bp Feature: domain Description: RVT_N Location: 691-934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 979-1624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 979-162 4 bp Feature: domain Description: GIIM Note: maturase Location: 1675-1909 bp Feature: domain Description: GIIM Note: maturase Location: 1675-1909 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: FUFB01000044.1 (31244 bp)
Overview 1 RT 1: 27634-31156 bp Neighborhood of RT #1 [27634, 31158] cas_Cmr5 Cmr6_III-B CRISPR_Cas6 RVT-CRISPR Cas_Cas1 Feature: gene Location: 27634-28071 bp Feature: domain Description: cas_Cmr5 Location: 27673-27823 bp Feature: domain Description: cas_Cmr5 Location: 27673 -27823 bp Feature: gene Location: 28068-28814 bp Feature: domain Description: Cmr6_III-B Location: 28143-28797 bp Feature: domain Description: Cmr6_III-B Location: 28143 -28797 bp Feature: gene Location: 28870-31158 bp Feature: domain Description: CRISPR_Cas6 Location: 29404-29758 bp Feature: domain Description: CRISPR_Cas6 Location: 29404-29758 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 29908-30520 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 29908-3 0520 bp Feature: domain Description: Cas_Cas1 Location: 30970-31156 bp Feature: domain Description: Cas_Cas1 Location: 3 0970-3 1156 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cas_Cmr5 (TIGR01881), Cmr6_III-B (cd09661), CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cas_Cas1 (pfam01867)