myRT

myRT report for GCA_900157285.1_13-1

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Seq: FUGG01000026.1 (2940 bp)
Overview 1 RT 1: 2-2613 bp Neighborhood of RT #1 [2, 2613] RVT_N RVT-GII GIIM Feature: gene Location: 2-160 bp Feature: gene Location: 165-335 bp Feature: gene Location: 358-2031 bp Feature: domain Description: RVT_N Location: 421-664 bp Feature: domain Description: RVT_N Location: 421 -664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 709-1357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 709-1 357 bp Feature: domain Description: GIIM Note: maturase Location: 1414-1645 bp Feature: domain Description: GIIM Note: maturase Location: 1 41 4-1 645 bp Feature: gene Location: 2068-2283 bp Feature: gene Location: 2314-2613 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: FUGG01000067.1 (36881 bp)
Overview 1 RT 1: 4256-9594 bp Neighborhood of RT #1 [4256, 9830] Cas2_I_II_III CRISPR_Cas6 RVT-CRISPR Cas1_I-II-III Cmr6_III-B cas_Cmr5 Feature: gene Location: 4256-4414 bp Feature: gene Location: 5190-5480 bp Feature: domain Description: Cas2_I_II_III Location: 5211-5430 bp Feature: domain Description: Cas2 _I_II_III Location: 52 11-5430 bp Feature: gene Location: 5500-8595 bp Feature: domain Description: CRISPR_Cas6 Location: 6034-6388 bp Feature: domain Description: CRISPR_Cas6 Location: 6034-6388 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 6538-7150 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 6538-7150 bp Feature: domain Description: Cas1_I-II-III Location: 7600-8554 bp Feature: domain Description: Cas1_I-II-III Location: 7600-8554 bp Feature: gene Location: 8656-9396 bp Feature: domain Description: Cmr6_III-B Location: 8731-9385 bp Feature: domain Description: Cmr6_III-B Location: 8731-9385 bp Feature: gene Location: 9393-9830 bp Feature: domain Description: cas_Cmr5 Location: 9432-9594 bp Feature: domain Description: cas_Cmr5 Location: 9432 -9594 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6_III-B (cd09661), cas_Cmr5 (TIGR01881)