myRT

myRT report for GCA_900157485.1_9789_6_35

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Seq: FTSN01000206.1 (7099 bp)
Overview 1 RT 1: 564-6343 bp Neighborhood of RT #1 [564, 6345] RVT-GII RVT-GII GIIM DDE_Tnp_IS66_C COG3547 ParB GIIM RVT-GII GIIM ushA Feature: gene Location: 564-1253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 765-1227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 765-1 227 bp Feature: gene Location: 1268-1795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1274-1418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 274-1 41 8 bp Feature: domain Description: GIIM Note: maturase Location: 1496-1718 bp Feature: domain Description: GIIM Note: maturase Location: 1 496-1 71 8 bp Feature: gene Location: 1911-2057 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1923-2034 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 923-2034 bp Feature: gene Location: 2084-2569 bp Feature: domain Description: COG3547 Location: 2102-2534 bp Feature: domain Description: COG3547 Location: 21 02-2534 bp Feature: gene Location: 2825-3223 bp Feature: domain Description: ParB Location: 2918-3203 bp Feature: domain Description: ParB Location: 291 8-3203 bp Feature: gene Location: 3363-3608 bp Feature: domain Description: GIIM Note: maturase Location: 3369-3510 bp Feature: domain Description: GIIM Note: maturase Location: 3369-351 0 bp Feature: gene Location: 3692-4219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3698-3842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3698-3842 bp Feature: domain Description: GIIM Note: maturase Location: 3926-4142 bp Feature: domain Description: GIIM Note: maturase Location: 3926-41 42 bp Feature: gene Location: 4572-4814 bp Feature: gene Location: 4726-6345 bp Feature: domain Description: ushA Location: 4741-6343 bp Feature: domain Description: ushA Location: 4741 -6343 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase ), ParB (smart00470), ushA (PRK09558)

Seq: FTSN01000343.1 (1126 bp)
Overview 1 RT 1: 2-911 bp Neighborhood of RT #1 [2, 928] RVT-GII Tra5 Feature: gene Location: 2-694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 302-695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 302 -695 bp Feature: gene Location: 707-928 bp Feature: domain Description: Tra5 Location: 719-911 bp Feature: domain Description: Tra5 Location: 719-911 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Tra5 (COG2801)

Seq: FTSN01000316.1 (1525 bp)
Overview 1 RT 1: 2-1223 bp Neighborhood of RT #1 [2, 1372] RVT-GII RVT-GII HTH_23 InsE Feature: gene Location: 2-193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98-188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98-188 bp Feature: gene Location: 254-610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263-584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263 -584 bp Feature: gene Location: 704-1372 bp Feature: domain Description: HTH_23 Location: 812-899 bp Feature: domain Description: HTH_23 Location: 812-899 bp Feature: domain Description: InsE Location: 1028-1223 bp Feature: domain Description: InsE Location: 1028-1223 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_23 (pfam13384), InsE (COG2963)

Seq: FTSN01000001.1 (89561 bp)
Overview 1 RT 1: 36860-44844 bp Neighborhood of RT #1 [36860, 44963] prfC DinI RVT-Retrons TIR_2 Caudo_TAP phage_tail_N Phage_fiber_2 Phage_fiber_2 Phage_fiber_2 Phage_fiber_2 Collar Phage_fiber Phage_fiber Phage_fiber Phage_fiber Feature: gene Location: 36860-38446 bp Feature: domain Description: prfC Location: 36878-38444 bp Feature: domain Description: prfC Location: 36878-384 4 4 bp Feature: gene Location: 38727-38927 bp Feature: domain Description: DinI Location: 38736-38907 bp Feature: domain Description: DinI Location: 38736-38907 bp Feature: gene Location: 39285-40889 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39576-40167 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39576-4 0167 bp Feature: domain Description: TIR_2 Location: 40494-40782 bp Feature: domain Description: TIR_2 Location: 4 04 94 -4 0782 bp Feature: gene Location: 41335-41919 bp Feature: domain Description: Caudo_TAP Location: 41551-41908 bp Feature: domain Description: Caudo_TAP Location: 4 1551-4 1908 bp Feature: gene Location: 41919-44963 bp Feature: domain Description: phage_tail_N Location: 41922-42321 bp Feature: domain Description: phage_tail_N Location: 4 1922-4 2321 bp Feature: domain Description: Phage_fiber_2 Location: 43305-43425 bp Feature: domain Description: Phage_fiber_2 Location: 4 3305-4 34 25 bp Feature: domain Description: Phage_fiber_2 Location: 43437-43557 bp Feature: domain Description: Phage_fiber_2 Location: 4 34 37-4 3557 bp Feature: domain Description: Phage_fiber_2 Location: 43569-43689 bp Feature: domain Description: Phage_fiber_2 Location: 4 3569-4 3689 bp Feature: domain Description: Phage_fiber_2 Location: 43701-43818 bp Feature: domain Description: Phage_fiber_2 Location: 4 3701-4 3818 bp Feature: domain Description: Collar Location: 44334-44472 bp Feature: domain Description: Collar Location: 4 4 334 -4 4 4 72 bp Feature: domain Description: Phage_fiber Location: 44523-44562 bp Feature: domain Description: Phage_fiber Location: 4 4 523-4 4 562 bp Feature: domain Description: Phage_fiber Location: 44619-44658 bp Feature: domain Description: Phage_fiber Location: 4 4 619-4 4 658 bp Feature: domain Description: Phage_fiber Location: 44766-44805 bp Feature: domain Description: Phage_fiber Location: 4 4 766-4 4 805 bp Feature: domain Description: Phage_fiber Location: 44811-44844 bp Feature: domain Description: Phage_fiber Location: 4 4 811-4 4 84 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), DinI (pfam06183), RVT-Retrons, TIR_2 (pfam13676), Caudo_TAP (pfam02413), phage_tail_N (pfam08400), Phage_fiber_2 (pfam03406), Collar (pfam07484), Phage_fiber (pfam03335)