myRT

myRT report for GCA_900158415.1_9803_4_39

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Seq: FTVO01000276.1 (2534 bp)
Overview 1 RT 1: 239-2533 bp Neighborhood of RT #1 [239, 2533] DDE_Tnp_1 RVT-GII RVT-GII InsE Feature: gene Location: 239-1021 bp Feature: domain Description: DDE_Tnp_1 Location: 245-953 bp Feature: domain Description: DDE_Tnp_1 Location: 245-953 bp Feature: gene Location: 1047-1250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1155-1245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 55-1 245 bp Feature: gene Location: 1311-1667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1320-1641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 320-1 641 bp Feature: gene Location: 1761-2264 bp Feature: domain Description: InsE Location: 1920-2118 bp Feature: domain Description: InsE Location: 1 920-21 1 8 bp Feature: gene Location: 2306-2533 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, InsE (COG2963)

Seq: FTVO01000226.1 (4250 bp)
Overview 1 RT 1: 113-3914 bp Neighborhood of RT #1 [113, 3916] RVT-GII RVT-GII GIIM ushA Feature: gene Location: 113-1240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 413-1070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 413-1070 bp Feature: gene Location: 1539-2066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1545-1689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1545-1689 bp Feature: domain Description: GIIM Note: maturase Location: 1773-1989 bp Feature: domain Description: GIIM Note: maturase Location: 1773-1989 bp Feature: gene Location: 2419-2661 bp Feature: gene Location: 2573-3916 bp Feature: domain Description: ushA Location: 2576-3914 bp Feature: domain Description: ushA Location: 2 576-3914 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), ushA (PRK09558)

Seq: FTVO01000205.1 (5417 bp)
Overview 1 RT 1: 417-2387 bp Neighborhood of RT #1 [417, 2422] RVT-GII RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 417-1106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 618-1080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 618-1080 bp Feature: gene Location: 1121-1648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1127-1271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1127-1271 bp Feature: domain Description: GIIM Note: maturase Location: 1349-1571 bp Feature: domain Description: GIIM Note: maturase Location: 13 49-1571 bp Feature: gene Location: 1764-1910 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1776-1887 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1776-1887 bp Feature: gene Location: 1937-2422 bp Feature: domain Description: COG3547 Location: 1955-2387 bp Feature: domain Description: COG3 547 Location: 1955-23 87 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase )