myRT

myRT report for GCA_900158495.1_9803_4_48

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Seq: FTVW01000209.1 (5336 bp)
Overview 1 RT 1: 187-4498 bp Neighborhood of RT #1 [187, 4500] Tra5 RVT-GII RVT-GII GIIM ushA Feature: gene Location: 187-408 bp Feature: domain Description: Tra5 Location: 199-391 bp Feature: domain Description: Tra5 Location: 1 99-391 bp Feature: gene Location: 421-1548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 721-1378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 721 -1 378 bp Feature: gene Location: 1847-2374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1853-1997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 853-1 997 bp Feature: domain Description: GIIM Note: maturase Location: 2081-2297 bp Feature: domain Description: GIIM Note: maturase Location: 2081 -2297 bp Feature: gene Location: 2727-2969 bp Feature: gene Location: 2881-4500 bp Feature: domain Description: ushA Location: 2896-4498 bp Feature: domain Description: ushA Location: 2896-4498 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), ushA (PRK09558)

Seq: FTVW01000258.1 (3279 bp)
Overview 1 RT 1: 507-3045 bp Neighborhood of RT #1 [507, 3194] DDE_Tnp_1 RVT-GII RVT-GII HTH_23 InsE Feature: gene Location: 507-728 bp Feature: gene Location: 1004-1786 bp Feature: domain Description: DDE_Tnp_1 Location: 1010-1718 bp Feature: domain Description: DDE_Tnp_1 Location: 1010-1718 bp Feature: gene Location: 1827-2030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1935-2025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1935-2 02 5 bp Feature: gene Location: 2091-2447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2100-2421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 100-2 42 1 bp Feature: gene Location: 2541-3194 bp Feature: domain Description: HTH_23 Location: 2634-2721 bp Feature: domain Description: HTH_2 3 Location: 2 634-2 72 1 bp Feature: domain Description: InsE Location: 2850-3045 bp Feature: domain Description: InsE Location: 2 850-3045 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, HTH_23 (pfam13384), InsE (COG2963)

Seq: FTVW01000202.1 (5707 bp)
Overview 1 RT 1: 3330-5704 bp Neighborhood of RT #1 [3330, 5704] COG3547 RVT-GII GIIM RVT-GII Feature: gene Location: 3330-3815 bp Feature: domain Description: COG3547 Location: 3348-3780 bp Feature: domain Description: COG3 547 Location: 3 3 48-3 780 bp Feature: gene Location: 3911-4078 bp Feature: gene Location: 4104-4631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4110-4254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4110-4254 bp Feature: domain Description: GIIM Note: maturase Location: 4332-4554 bp Feature: domain Description: GIIM Note: maturase Location: 43 3 2-4554 bp Feature: gene Location: 4646-5335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4847-5309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4847-53 09 bp Feature: gene Location: 5330-5704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)