myRT

myRT report for GCA_900158855.1_9803_4_85

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Seq: FTXG01000263.1 (3365 bp)
Overview 1 RT 1: 546-3364 bp Neighborhood of RT #1 [546, 3364] DDE_Tnp_1 RVT-GII RVT-GII InsE Feature: gene Location: 546-767 bp Feature: gene Location: 1043-1825 bp Feature: domain Description: DDE_Tnp_1 Location: 1049-1757 bp Feature: domain Description: DDE_Tnp_1 Location: 1 049-1 757 bp Feature: gene Location: 1851-2054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1959-2049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 959-2049 bp Feature: gene Location: 2115-2471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2124-2445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 24-2445 bp Feature: gene Location: 2565-3068 bp Feature: domain Description: InsE Location: 2724-2922 bp Feature: domain Description: InsE Location: 2724-2922 bp Feature: gene Location: 3110-3364 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, InsE (COG2963)

Seq: FTXG01000200.1 (5919 bp)
Overview 1 RT 1: 539-2509 bp Neighborhood of RT #1 [539, 2544] RVT-GII RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 539-1228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 740-1202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 740-12 02 bp Feature: gene Location: 1243-1770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1249-1393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 49-1393 bp Feature: domain Description: GIIM Note: maturase Location: 1471-1693 bp Feature: domain Description: GIIM Note: maturase Location: 1471-1693 bp Feature: gene Location: 1886-2032 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1898-2009 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1898-2 009 bp Feature: gene Location: 2059-2544 bp Feature: domain Description: COG3547 Location: 2077-2509 bp Feature: domain Description: COG3547 Location: 2 077-2 509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase )

Seq: FTXG01000208.1 (5223 bp)
Overview 1 RT 1: 183-4494 bp Neighborhood of RT #1 [183, 4496] Tra5 RVT-GII RVT-GII GIIM ushA Feature: gene Location: 183-404 bp Feature: domain Description: Tra5 Location: 195-387 bp Feature: domain Description: Tra5 Location: 195-3 87 bp Feature: gene Location: 417-1544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 717-1374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 717-13 74 bp Feature: gene Location: 1843-2370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1849-1993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1849-1993 bp Feature: domain Description: GIIM Note: maturase Location: 2077-2293 bp Feature: domain Description: GIIM Note: maturase Location: 2077-2293 bp Feature: gene Location: 2723-2965 bp Feature: gene Location: 2877-4496 bp Feature: domain Description: ushA Location: 2892-4494 bp Feature: domain Description: ushA Location: 2892-4494 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), ushA (PRK09558)