myRT

myRT report for GCA_900159185.1_16703_8_25

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Seq: FTYN01000205.1 (5968 bp)
Overview 1 RT 1: 3378-5357 bp Neighborhood of RT #1 [3378, 5383] COG3547 RVT-GII GIIM RVT-GII Feature: gene Location: 3378-3863 bp Feature: domain Description: COG3547 Location: 3396-3828 bp Feature: domain Description: COG3547 Location: 3396-3828 bp Feature: gene Location: 3959-4126 bp Feature: gene Location: 4152-4679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4158-4302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 58-4302 bp Feature: domain Description: GIIM Note: maturase Location: 4380-4602 bp Feature: domain Description: GIIM Note: maturase Location: 4380-4602 bp Feature: gene Location: 4694-5383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4895-5357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4895-5357 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: FTYN01000271.1 (3284 bp)
Overview 1 RT 1: 411-2934 bp Neighborhood of RT #1 [411, 3083] DDE_Tnp_1 RVT-GII RVT-GII HTH_23 InsE Feature: gene Location: 411-632 bp Feature: gene Location: 908-1690 bp Feature: domain Description: DDE_Tnp_1 Location: 914-1622 bp Feature: domain Description: DDE_Tnp_1 Location: 914-162 2 bp Feature: gene Location: 1716-1919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1824-1914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 182 4-1914 bp Feature: gene Location: 1980-2336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1989-2310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1989-2 310 bp Feature: gene Location: 2430-3083 bp Feature: domain Description: HTH_23 Location: 2523-2610 bp Feature: domain Description: HTH_2 3 Location: 2 52 3-2 610 bp Feature: domain Description: InsE Location: 2739-2934 bp Feature: domain Description: InsE Location: 2 739-2 934 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, HTH_23 (pfam13384), InsE (COG2963)

Seq: FTYN01000291.1 (2711 bp)
Overview 1 RT 1: 237-2347 bp Neighborhood of RT #1 [237, 2424] Tra5 RVT-GII RVT-GII GIIM Feature: gene Location: 237-458 bp Feature: domain Description: Tra5 Location: 249-441 bp Feature: domain Description: Tra5 Location: 249-441 bp Feature: gene Location: 471-1598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 771-1428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 771-1428 bp Feature: gene Location: 1897-2424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1903-2047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1903 -2047 bp Feature: domain Description: GIIM Note: maturase Location: 2131-2347 bp Feature: domain Description: GIIM Note: maturase Location: 213 1-23 47 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388)