myRT

myRT report for GCA_900159225.1_16703_8_29

Download annotations/find similar RTs

Seq: FTYR01000283.1 (2673 bp)
Overview 1 RT 1: 197-2307 bp Neighborhood of RT #1 [197, 2384] Tra5 RVT-GII RVT-GII GIIM Feature: gene Location: 197-418 bp Feature: domain Description: Tra5 Location: 209-401 bp Feature: domain Description: Tra5 Location: 209-401 bp Feature: gene Location: 431-1558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 731-1388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 731 -1 388 bp Feature: gene Location: 1857-2384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1863-2007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 863-2007 bp Feature: domain Description: GIIM Note: maturase Location: 2091-2307 bp Feature: domain Description: GIIM Note: maturase Location: 2091 -2307 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388)

Seq: FTYR01000080.1 (19537 bp)
Overview 1 RT 1: 3-5074 bp Neighborhood of RT #1 [3, 5074] Phage_fiber_2 Phage_fiber_2 Phage_fiber_2 Collar Phage_fiber Phage_fiber Phage_fiber Phage_fiber Phage_fiber Caudo_TAP RVT-UG17 SLATT_5 Feature: gene Location: 3-2261 bp Feature: domain Description: Phage_fiber_2 Location: 492-612 bp Feature: domain Description: Phage_fiber_2 Location: 492 -612 bp Feature: domain Description: Phage_fiber_2 Location: 624-744 bp Feature: domain Description: Phage_fiber_2 Location: 62 4-744 bp Feature: domain Description: Phage_fiber_2 Location: 756-876 bp Feature: domain Description: Phage_fiber_2 Location: 756-876 bp Feature: domain Description: Collar Location: 1632-1770 bp Feature: domain Description: Collar Location: 1632 -1770 bp Feature: domain Description: Phage_fiber Location: 1821-1860 bp Feature: domain Description: Phage_fiber Location: 182 1-1860 bp Feature: domain Description: Phage_fiber Location: 1917-1956 bp Feature: domain Description: Phage_fiber Location: 1917-1956 bp Feature: domain Description: Phage_fiber Location: 1962-1989 bp Feature: domain Description: Phage_fiber Location: 1962 -1989 bp Feature: domain Description: Phage_fiber Location: 2064-2103 bp Feature: domain Description: Phage_fiber Location: 2 064-2 103 bp Feature: domain Description: Phage_fiber Location: 2109-2142 bp Feature: domain Description: Phage_fiber Location: 2 109-2 142 bp Feature: gene Location: 2261-2845 bp Feature: domain Description: Caudo_TAP Location: 2477-2834 bp Feature: domain Description: Caudo_TAP Location: 2 477-2 834 bp Feature: gene Location: 2958-4328 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3186-3792 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3186-3792 bp Feature: gene Location: 4306-4857 bp Feature: domain Description: SLATT_5 Location: 4312-4828 bp Feature: domain Description: SLATT_5 Location: 4312 -482 8 bp Feature: gene Location: 4895-5074 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_fiber_2 (pfam03406), Collar (pfam07484), Phage_fiber (pfam03335), Caudo_TAP (pfam02413), RVT-UG17, SLATT_5 (pfam18160)

Seq: FTYR01000192.1 (6778 bp)
Overview 1 RT 1: 570-2540 bp Neighborhood of RT #1 [570, 2575] RVT-GII RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 570-1259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 771-1224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 771-1224 bp Feature: gene Location: 1274-1801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1280-1424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1280-1424 bp Feature: domain Description: GIIM Note: maturase Location: 1502-1724 bp Feature: domain Description: GIIM Note: maturase Location: 1502-1724 bp Feature: gene Location: 1917-2063 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1929-2040 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1929-2040 bp Feature: gene Location: 2090-2575 bp Feature: domain Description: COG3547 Location: 2108-2540 bp Feature: domain Description: COG3 547 Location: 2108-2540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase )