myRT

myRT report for GCA_900159255.1_16703_8_32

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Seq: FTYV01000282.1 (2784 bp)
Overview 1 RT 1: 420-2461 bp Neighborhood of RT #1 [420, 2610] DDE_Tnp_1 RVT-GII RVT-GII HTH_23 InsE Feature: gene Location: 420-1202 bp Feature: domain Description: DDE_Tnp_1 Location: 426-1134 bp Feature: domain Description: DDE_Tnp_1 Location: 426-1 1 34 bp Feature: gene Location: 1228-1431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1336-1426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 336-1 426 bp Feature: gene Location: 1492-1848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1501-1822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 501 -1 822 bp Feature: gene Location: 1942-2610 bp Feature: domain Description: HTH_23 Location: 2050-2137 bp Feature: domain Description: HTH_23 Location: 2050-21 37 bp Feature: domain Description: InsE Location: 2266-2461 bp Feature: domain Description: InsE Location: 2266-2461 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, HTH_23 (pfam13384), InsE (COG2963)

Seq: FTYV01000210.1 (5431 bp)
Overview 1 RT 1: 2368-5133 bp Neighborhood of RT #1 [2368, 5150] RVT-GII GIIM RVT-GII Tra5 Feature: gene Location: 2368-2610 bp Feature: gene Location: 2782-2937 bp Feature: gene Location: 2963-3490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2969-3113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 969-3113 bp Feature: domain Description: GIIM Note: maturase Location: 3197-3413 bp Feature: domain Description: GIIM Note: maturase Location: 3197-3413 bp Feature: gene Location: 3500-3772 bp Feature: gene Location: 3789-4916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4089-4746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4089-4746 bp Feature: gene Location: 4929-5150 bp Feature: domain Description: Tra5 Location: 4941-5133 bp Feature: domain Description: Tra5 Location: 4941-5133 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Tra5 (COG2801)

Seq: FTYV01000165.1 (8402 bp)
Overview 1 RT 1: 586-2556 bp Neighborhood of RT #1 [586, 2591] RVT-GII RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 586-1275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 787-1249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 787-1249 bp Feature: gene Location: 1290-1817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1296-1440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1296-1440 bp Feature: domain Description: GIIM Note: maturase Location: 1518-1740 bp Feature: domain Description: GIIM Note: maturase Location: 1518-1740 bp Feature: gene Location: 1933-2079 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1945-2056 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1945-2056 bp Feature: gene Location: 2106-2591 bp Feature: domain Description: COG3547 Location: 2124-2556 bp Feature: domain Description: COG3 547 Location: 2124-2556 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase )