myRT

myRT report for GCA_900159375.1_8489_1_60

Download annotations/find similar RTs

Seq: FTZG01000204.1 (5922 bp)
Overview 1 RT 1: 532-2502 bp Neighborhood of RT #1 [532, 2537] RVT-GII RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 532-1221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 733-1195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 733-1 1 95 bp Feature: gene Location: 1236-1763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1242-1386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 242-1 386 bp Feature: domain Description: GIIM Note: maturase Location: 1464-1686 bp Feature: domain Description: GIIM Note: maturase Location: 1 464-1 686 bp Feature: gene Location: 1879-2025 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1891-2002 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 891 -2002 bp Feature: gene Location: 2052-2537 bp Feature: domain Description: COG3547 Location: 2070-2502 bp Feature: domain Description: COG3547 Location: 2070-2502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase )

Seq: FTZG01000214.1 (5272 bp)
Overview 1 RT 1: 2292-5057 bp Neighborhood of RT #1 [2292, 5074] RVT-GII GIIM RVT-GII Tra5 Feature: gene Location: 2292-2534 bp Feature: gene Location: 2706-2861 bp Feature: gene Location: 2887-3414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2893-3037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 893-3037 bp Feature: domain Description: GIIM Note: maturase Location: 3121-3337 bp Feature: domain Description: GIIM Note: maturase Location: 312 1-3337 bp Feature: gene Location: 3424-3696 bp Feature: gene Location: 3713-4840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4013-4670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4013-4670 bp Feature: gene Location: 4853-5074 bp Feature: domain Description: Tra5 Location: 4865-5057 bp Feature: domain Description: Tra5 Location: 4865-5057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Tra5 (COG2801)

Seq: FTZG01000266.1 (3297 bp)
Overview 1 RT 1: 3-3294 bp Neighborhood of RT #1 [3, 3294] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 3-278 bp Feature: domain Description: PHA02517 Location: 6-213 bp Feature: domain Description: PHA02517 Location: 6-213 bp Feature: gene Location: 870-2393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1143-1875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1143 -1875 bp Feature: domain Description: GIIM Note: maturase Location: 1950-2148 bp Feature: domain Description: GIIM Note: maturase Location: 1950-2148 bp Feature: gene Location: 2570-2956 bp Feature: domain Description: PHA02517 Location: 2573-2954 bp Feature: domain Description: PHA02517 Location: 2573 -2954 bp Feature: gene Location: 3133-3294 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: FTZG01000263.1 (3388 bp)
Overview 1 RT 1: 526-3049 bp Neighborhood of RT #1 [526, 3198] DDE_Tnp_1 RVT-GII RVT-GII HTH_23 InsE Feature: gene Location: 526-747 bp Feature: gene Location: 1023-1805 bp Feature: domain Description: DDE_Tnp_1 Location: 1029-1737 bp Feature: domain Description: DDE_Tnp_1 Location: 1029-1737 bp Feature: gene Location: 1831-2034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1939-2029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1939-2029 bp Feature: gene Location: 2095-2451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2104-2425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2104 -24 25 bp Feature: gene Location: 2545-3198 bp Feature: domain Description: HTH_23 Location: 2638-2725 bp Feature: domain Description: HTH_23 Location: 2638-2725 bp Feature: domain Description: InsE Location: 2854-3049 bp Feature: domain Description: InsE Location: 2854 -304 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, HTH_23 (pfam13384), InsE (COG2963)