myRT

myRT report for GCA_900159385.1_8489_1_61

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Seq: FTZH01000256.1 (3385 bp)
Overview 1 RT 1: 526-3049 bp Neighborhood of RT #1 [526, 3198] DDE_Tnp_1 RVT-GII RVT-GII HTH_23 InsE Feature: gene Location: 526-747 bp Feature: gene Location: 1023-1805 bp Feature: domain Description: DDE_Tnp_1 Location: 1029-1737 bp Feature: domain Description: DDE_Tnp_1 Location: 1 029-1 737 bp Feature: gene Location: 1831-2034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1939-2029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 939-2029 bp Feature: gene Location: 2095-2451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2104-2425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 04-2425 bp Feature: gene Location: 2545-3198 bp Feature: domain Description: HTH_23 Location: 2638-2725 bp Feature: domain Description: HTH_23 Location: 2638-2725 bp Feature: domain Description: InsE Location: 2854-3049 bp Feature: domain Description: InsE Location: 2854-3049 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, HTH_23 (pfam13384), InsE (COG2963)

Seq: FTZH01000157.1 (9778 bp)
Overview 1 RT 1: 6538-9713 bp Neighborhood of RT #1 [6538, 9713] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 6538-6864 bp Feature: domain Description: InsE Location: 6541-6862 bp Feature: domain Description: InsE Location: 6541-6862 bp Feature: gene Location: 6962-7408 bp Feature: domain Description: PHA02517 Location: 6965-7406 bp Feature: domain Description: PHA02 517 Location: 6965-7406 bp Feature: gene Location: 7525-9048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7798-8530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7798-8530 bp Feature: domain Description: GIIM Note: maturase Location: 8605-8803 bp Feature: domain Description: GIIM Note: maturase Location: 8605-8803 bp Feature: gene Location: 9342-9713 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: FTZH01000202.1 (6036 bp)
Overview 1 RT 1: 3492-5471 bp Neighborhood of RT #1 [3492, 5497] COG3547 RVT-GII GIIM RVT-GII Feature: gene Location: 3492-3977 bp Feature: domain Description: COG3547 Location: 3510-3942 bp Feature: domain Description: COG3 547 Location: 3 510-3 942 bp Feature: gene Location: 4073-4240 bp Feature: gene Location: 4266-4793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4272-4416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4272-4416 bp Feature: domain Description: GIIM Note: maturase Location: 4494-4716 bp Feature: domain Description: GIIM Note: maturase Location: 4494-4716 bp Feature: gene Location: 4808-5497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5009-5471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5009-5471 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: FTZH01000210.1 (5336 bp)
Overview 1 RT 1: 2368-5133 bp Neighborhood of RT #1 [2368, 5150] RVT-GII GIIM RVT-GII Tra5 Feature: gene Location: 2368-2610 bp Feature: gene Location: 2782-2937 bp Feature: gene Location: 2963-3490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2969-3113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2969-3113 bp Feature: domain Description: GIIM Note: maturase Location: 3197-3413 bp Feature: domain Description: GIIM Note: maturase Location: 3197-34 13 bp Feature: gene Location: 3500-3772 bp Feature: gene Location: 3789-4916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4089-4746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 089-4 74 6 bp Feature: gene Location: 4929-5150 bp Feature: domain Description: Tra5 Location: 4941-5133 bp Feature: domain Description: Tra5 Location: 4 94 1-5133 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Tra5 (COG2801)