myRT

myRT report for GCA_900159395.1_8489_1_62

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Seq: FTZI01000273.1 (3347 bp)
Overview 1 RT 1: 526-3344 bp Neighborhood of RT #1 [526, 3344] DDE_Tnp_1 RVT-GII RVT-GII InsE Feature: gene Location: 526-747 bp Feature: gene Location: 1023-1805 bp Feature: domain Description: DDE_Tnp_1 Location: 1029-1737 bp Feature: domain Description: DDE_Tnp_1 Location: 1 029-1 737 bp Feature: gene Location: 1831-2034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1939-2029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 939-2029 bp Feature: gene Location: 2095-2451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2104-2425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 04-2425 bp Feature: gene Location: 2545-3048 bp Feature: domain Description: InsE Location: 2704-2902 bp Feature: domain Description: InsE Location: 2704-2902 bp Feature: gene Location: 3090-3344 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, InsE (COG2963)

Seq: FTZI01000204.1 (5886 bp)
Overview 1 RT 1: 3360-5339 bp Neighborhood of RT #1 [3360, 5365] COG3547 RVT-GII GIIM RVT-GII Feature: gene Location: 3360-3845 bp Feature: domain Description: COG3547 Location: 3378-3810 bp Feature: domain Description: COG3547 Location: 3378-3810 bp Feature: gene Location: 3941-4108 bp Feature: gene Location: 4134-4661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4140-4284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4140-42 84 bp Feature: domain Description: GIIM Note: maturase Location: 4362-4584 bp Feature: domain Description: GIIM Note: maturase Location: 4362 -4584 bp Feature: gene Location: 4676-5365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4877-5339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4877-5339 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: FTZI01000295.1 (2591 bp)
Overview 1 RT 1: 2-2590 bp Neighborhood of RT #1 [2, 2589] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 2-139 bp Feature: domain Description: PHA02517 Location: 8-74 bp Feature: domain Description: PHA02517 Location: 8-74 bp Feature: gene Location: 731-2254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1004-1736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1004-173 6 bp Feature: domain Description: GIIM Note: maturase Location: 1811-2009 bp Feature: domain Description: GIIM Note: maturase Location: 1811-2009 bp Feature: gene Location: 2431-2589 bp Feature: domain Description: PHA02517 Location: 2434-2590 bp Feature: domain Description: PHA02517 Location: 243 4-2590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: FTZI01000214.1 (5336 bp)
Overview 1 RT 1: 2368-5133 bp Neighborhood of RT #1 [2368, 5150] RVT-GII GIIM RVT-GII Tra5 Feature: gene Location: 2368-2610 bp Feature: gene Location: 2782-2937 bp Feature: gene Location: 2963-3490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2969-3113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2969-3113 bp Feature: domain Description: GIIM Note: maturase Location: 3197-3413 bp Feature: domain Description: GIIM Note: maturase Location: 3197-34 13 bp Feature: gene Location: 3500-3772 bp Feature: gene Location: 3789-4916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4089-4746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 089-4 74 6 bp Feature: gene Location: 4929-5150 bp Feature: domain Description: Tra5 Location: 4941-5133 bp Feature: domain Description: Tra5 Location: 4 94 1-5133 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Tra5 (COG2801)