myRT

myRT report for GCA_900159405.1_8489_1_63

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Seq: FTZK01000262.1 (3324 bp)
Overview 1 RT 1: 498-3322 bp Neighborhood of RT #1 [498, 3322] DDE_Tnp_1 RVT-GII RVT-GII InsE Feature: gene Location: 498-719 bp Feature: gene Location: 995-1777 bp Feature: domain Description: DDE_Tnp_1 Location: 1001-1709 bp Feature: domain Description: DDE_Tnp_1 Location: 1 001 -1 709 bp Feature: gene Location: 1803-2006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1911-2001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 91 1 -2001 bp Feature: gene Location: 2067-2423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2076-2397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2076-2397 bp Feature: gene Location: 2517-3020 bp Feature: domain Description: InsE Location: 2676-2874 bp Feature: domain Description: InsE Location: 2676-2874 bp Feature: gene Location: 3062-3322 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, InsE (COG2963)

Seq: FTZK01000202.1 (5885 bp)
Overview 1 RT 1: 3359-5338 bp Neighborhood of RT #1 [3359, 5364] COG3547 RVT-GII GIIM RVT-GII Feature: gene Location: 3359-3844 bp Feature: domain Description: COG3547 Location: 3377-3809 bp Feature: domain Description: COG3547 Location: 3377-3809 bp Feature: gene Location: 3940-4107 bp Feature: gene Location: 4133-4660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4139-4283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4139-42 83 bp Feature: domain Description: GIIM Note: maturase Location: 4361-4583 bp Feature: domain Description: GIIM Note: maturase Location: 4361-4583 bp Feature: gene Location: 4675-5364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4876-5338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4876-5338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: FTZK01000212.1 (5255 bp)
Overview 1 RT 1: 187-4498 bp Neighborhood of RT #1 [187, 4500] Tra5 RVT-GII RVT-GII GIIM ushA Feature: gene Location: 187-408 bp Feature: domain Description: Tra5 Location: 199-391 bp Feature: domain Description: Tra5 Location: 199-3 91 bp Feature: gene Location: 421-1548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 721-1378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 721-13 78 bp Feature: gene Location: 1847-2374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1853-1997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1853 -1997 bp Feature: domain Description: GIIM Note: maturase Location: 2081-2297 bp Feature: domain Description: GIIM Note: maturase Location: 2081-2297 bp Feature: gene Location: 2727-2969 bp Feature: gene Location: 2881-4500 bp Feature: domain Description: ushA Location: 2896-4498 bp Feature: domain Description: ushA Location: 2896-4498 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), ushA (PRK09558)

Seq: FTZK01000203.1 (5755 bp)
Overview 1 RT 1: 2-3205 bp Neighborhood of RT #1 [2, 3207] PHA02517 RVT-GII GIIM PHA02517 PRK13734 Feature: gene Location: 2-133 bp Feature: domain Description: PHA02517 Location: 5-68 bp Feature: domain Description: PHA02517 Location: 5-68 bp Feature: gene Location: 725-2248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998-1730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998-1730 bp Feature: domain Description: GIIM Note: maturase Location: 1805-2003 bp Feature: domain Description: GIIM Note: maturase Location: 1805-2003 bp Feature: gene Location: 2425-2811 bp Feature: domain Description: PHA02517 Location: 2428-2809 bp Feature: domain Description: PHA02517 Location: 24 28-2809 bp Feature: gene Location: 2926-3207 bp Feature: domain Description: PRK13734 Location: 2929-3205 bp Feature: domain Description: PRK13734 Location: 2929-3205 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK13734 (conjugal transfer pilin subunit TraA; Provisional)