myRT

myRT report for GCA_900159455.1_8489_1_68

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Seq: FTZP01000203.1 (6047 bp)
Overview 1 RT 1: 540-2510 bp Neighborhood of RT #1 [540, 2545] RVT-GII RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 540-1229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 741-1203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 741 -1 203 bp Feature: gene Location: 1244-1771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1250-1394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 250-1 394 bp Feature: domain Description: GIIM Note: maturase Location: 1472-1694 bp Feature: domain Description: GIIM Note: maturase Location: 1 472-1 694 bp Feature: gene Location: 1887-2033 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1899-2010 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 899-201 0 bp Feature: gene Location: 2060-2545 bp Feature: domain Description: COG3547 Location: 2078-2510 bp Feature: domain Description: COG3547 Location: 2078-251 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase )

Seq: FTZP01000213.1 (5336 bp)
Overview 1 RT 1: 2368-5133 bp Neighborhood of RT #1 [2368, 5150] RVT-GII GIIM RVT-GII Tra5 Feature: gene Location: 2368-2610 bp Feature: gene Location: 2782-2937 bp Feature: gene Location: 2963-3490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2969-3113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 969-3113 bp Feature: domain Description: GIIM Note: maturase Location: 3197-3413 bp Feature: domain Description: GIIM Note: maturase Location: 3197-3413 bp Feature: gene Location: 3500-3772 bp Feature: gene Location: 3789-4916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4089-4746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4089-4746 bp Feature: gene Location: 4929-5150 bp Feature: domain Description: Tra5 Location: 4941-5133 bp Feature: domain Description: Tra5 Location: 4941-5133 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Tra5 (COG2801)

Seq: FTZP01000262.1 (3318 bp)
Overview 1 RT 1: 491-3315 bp Neighborhood of RT #1 [491, 3315] DDE_Tnp_1 RVT-GII RVT-GII InsE Feature: gene Location: 491-712 bp Feature: gene Location: 988-1770 bp Feature: domain Description: DDE_Tnp_1 Location: 994-1702 bp Feature: domain Description: DDE_Tnp_1 Location: 994-1702 bp Feature: gene Location: 1796-1999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1904-1994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1904-1994 bp Feature: gene Location: 2060-2416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2069-2390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2069-23 90 bp Feature: gene Location: 2510-3013 bp Feature: domain Description: InsE Location: 2669-2867 bp Feature: domain Description: InsE Location: 2669-2867 bp Feature: gene Location: 3055-3315 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, InsE (COG2963)

Seq: FTZP01000163.1 (8467 bp)
Overview 1 RT 1: 2-3211 bp Neighborhood of RT #1 [2, 3213] PHA02517 RVT-GII GIIM PHA02517 PRK13734 Feature: gene Location: 2-139 bp Feature: domain Description: PHA02517 Location: 8-74 bp Feature: domain Description: PHA02517 Location: 8-74 bp Feature: gene Location: 731-2254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1004-1736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1004 -1736 bp Feature: domain Description: GIIM Note: maturase Location: 1811-2009 bp Feature: domain Description: GIIM Note: maturase Location: 1811-2009 bp Feature: gene Location: 2431-2817 bp Feature: domain Description: PHA02517 Location: 2434-2815 bp Feature: domain Description: PHA02517 Location: 24 34 -2815 bp Feature: gene Location: 2932-3213 bp Feature: domain Description: PRK13734 Location: 2935-3211 bp Feature: domain Description: PRK13734 Location: 2935-3211 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK13734 (conjugal transfer pilin subunit TraA; Provisional)