myRT

myRT report for GCA_900159535.1_8489_1_77

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Seq: FTZW01000288.1 (2424 bp)
Overview 1 RT 1: 171-2359 bp Neighborhood of RT #1 [171, 2359] RVT-GII GIIM Feature: gene Location: 171-1694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 444-1176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 444-1 1 76 bp Feature: domain Description: GIIM Note: maturase Location: 1251-1449 bp Feature: domain Description: GIIM Note: maturase Location: 1 251 -1 449 bp Feature: gene Location: 1988-2359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: FTZW01000265.1 (3382 bp)
Overview 1 RT 1: 526-3049 bp Neighborhood of RT #1 [526, 3198] DDE_Tnp_1 RVT-GII RVT-GII HTH_23 InsE Feature: gene Location: 526-747 bp Feature: gene Location: 1023-1805 bp Feature: domain Description: DDE_Tnp_1 Location: 1029-1737 bp Feature: domain Description: DDE_Tnp_1 Location: 102 9-1737 bp Feature: gene Location: 1831-2034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1939-2029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1939-2 02 9 bp Feature: gene Location: 2095-2451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2104-2425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 104-2 42 5 bp Feature: gene Location: 2545-3198 bp Feature: domain Description: HTH_23 Location: 2638-2725 bp Feature: domain Description: HTH_2 3 Location: 2 638-2 72 5 bp Feature: domain Description: InsE Location: 2854-3049 bp Feature: domain Description: InsE Location: 2 854-3049 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, HTH_23 (pfam13384), InsE (COG2963)

Seq: FTZW01000178.1 (10803 bp)
Overview 1 RT 1: 1-2474 bp Neighborhood of RT #1 [1, 2509] RVT-GII RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 1-210 bp Feature: gene Location: 504-1193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 705-1167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 705-1167 bp Feature: gene Location: 1208-1735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1214-1358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1214-13 58 bp Feature: domain Description: GIIM Note: maturase Location: 1436-1658 bp Feature: domain Description: GIIM Note: maturase Location: 143 6-1658 bp Feature: gene Location: 1851-1997 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1863-1974 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1863 -1974 bp Feature: gene Location: 2024-2509 bp Feature: domain Description: COG3547 Location: 2042-2474 bp Feature: domain Description: COG3 547 Location: 2042-2474 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase )

Seq: FTZW01000213.1 (5336 bp)
Overview 1 RT 1: 187-4498 bp Neighborhood of RT #1 [187, 4500] Tra5 RVT-GII RVT-GII GIIM ushA Feature: gene Location: 187-408 bp Feature: domain Description: Tra5 Location: 199-391 bp Feature: domain Description: Tra5 Location: 199-391 bp Feature: gene Location: 421-1548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 721-1378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 721-1378 bp Feature: gene Location: 1847-2374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1853-1997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1853-1997 bp Feature: domain Description: GIIM Note: maturase Location: 2081-2297 bp Feature: domain Description: GIIM Note: maturase Location: 2081-2297 bp Feature: gene Location: 2727-2969 bp Feature: gene Location: 2881-4500 bp Feature: domain Description: ushA Location: 2896-4498 bp Feature: domain Description: ushA Location: 2896-4 4 98 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), ushA (PRK09558)