myRT

myRT report for GCA_900159595.1_8489_1_82

Download annotations/find similar RTs

Seq: FUAC01000289.1 (2591 bp)
Overview 1 RT 1: 2-2590 bp Neighborhood of RT #1 [2, 2589] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 2-139 bp Feature: domain Description: PHA02517 Location: 8-74 bp Feature: domain Description: PHA0251 7 Location: 8-74 bp Feature: gene Location: 731-2254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1004-1736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 004-1 736 bp Feature: domain Description: GIIM Note: maturase Location: 1811-2009 bp Feature: domain Description: GIIM Note: maturase Location: 1 81 1 -2009 bp Feature: gene Location: 2431-2589 bp Feature: domain Description: PHA02517 Location: 2434-2590 bp Feature: domain Description: PHA0251 7 Location: 2434-2590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: FUAC01000269.1 (3336 bp)
Overview 1 RT 1: 497-3020 bp Neighborhood of RT #1 [497, 3169] DDE_Tnp_1 RVT-GII RVT-GII HTH_23 InsE Feature: gene Location: 497-718 bp Feature: gene Location: 994-1776 bp Feature: domain Description: DDE_Tnp_1 Location: 1000-1708 bp Feature: domain Description: DDE_Tnp_1 Location: 1000-1708 bp Feature: gene Location: 1802-2005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1910-2000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1910-2 000 bp Feature: gene Location: 2066-2422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2075-2396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 075-2 396 bp Feature: gene Location: 2516-3169 bp Feature: domain Description: HTH_23 Location: 2609-2696 bp Feature: domain Description: HTH_2 3 Location: 2 609-2 696 bp Feature: domain Description: InsE Location: 2825-3020 bp Feature: domain Description: InsE Location: 2 82 5-302 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, HTH_23 (pfam13384), InsE (COG2963)

Seq: FUAC01000206.1 (5854 bp)
Overview 1 RT 1: 3328-5307 bp Neighborhood of RT #1 [3328, 5333] COG3547 RVT-GII GIIM RVT-GII Feature: gene Location: 3328-3813 bp Feature: domain Description: COG3547 Location: 3346-3778 bp Feature: domain Description: COG3 547 Location: 3 3 46-3 778 bp Feature: gene Location: 3909-4076 bp Feature: gene Location: 4102-4629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4108-4252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4108-4252 bp Feature: domain Description: GIIM Note: maturase Location: 4330-4552 bp Feature: domain Description: GIIM Note: maturase Location: 43 3 0-4552 bp Feature: gene Location: 4644-5333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4845-5307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4845-53 07 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: FUAC01000214.1 (5255 bp)
Overview 1 RT 1: 187-4498 bp Neighborhood of RT #1 [187, 4500] Tra5 RVT-GII RVT-GII GIIM ushA Feature: gene Location: 187-408 bp Feature: domain Description: Tra5 Location: 199-391 bp Feature: domain Description: Tra5 Location: 199-391 bp Feature: gene Location: 421-1548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 721-1378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 721-1378 bp Feature: gene Location: 1847-2374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1853-1997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1853-1997 bp Feature: domain Description: GIIM Note: maturase Location: 2081-2297 bp Feature: domain Description: GIIM Note: maturase Location: 2081-2297 bp Feature: gene Location: 2727-2969 bp Feature: gene Location: 2881-4500 bp Feature: domain Description: ushA Location: 2896-4498 bp Feature: domain Description: ushA Location: 2896-4 4 98 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), ushA (PRK09558)