myRT

myRT report for GCA_900159665.1_8489_1_91

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Seq: FUAH01000213.1 (5255 bp)
Overview 1 RT 1: 187-4498 bp Neighborhood of RT #1 [187, 4500] Tra5 RVT-GII RVT-GII GIIM ushA Feature: gene Location: 187-408 bp Feature: domain Description: Tra5 Location: 199-391 bp Feature: domain Description: Tra5 Location: 1 99-391 bp Feature: gene Location: 421-1548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 721-1378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 721 -1 378 bp Feature: gene Location: 1847-2374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1853-1997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 853-1 997 bp Feature: domain Description: GIIM Note: maturase Location: 2081-2297 bp Feature: domain Description: GIIM Note: maturase Location: 2081 -2297 bp Feature: gene Location: 2727-2969 bp Feature: gene Location: 2881-4500 bp Feature: domain Description: ushA Location: 2896-4498 bp Feature: domain Description: ushA Location: 2896-4498 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), ushA (PRK09558)

Seq: FUAH01000265.1 (3352 bp)
Overview 1 RT 1: 526-3350 bp Neighborhood of RT #1 [526, 3350] DDE_Tnp_1 RVT-GII RVT-GII InsE Feature: gene Location: 526-747 bp Feature: gene Location: 1023-1805 bp Feature: domain Description: DDE_Tnp_1 Location: 1029-1737 bp Feature: domain Description: DDE_Tnp_1 Location: 102 9-1737 bp Feature: gene Location: 1831-2034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1939-2029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1939-2 02 9 bp Feature: gene Location: 2095-2451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2104-2425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 104-2 42 5 bp Feature: gene Location: 2545-3048 bp Feature: domain Description: InsE Location: 2704-2902 bp Feature: domain Description: InsE Location: 2 704-2 902 bp Feature: gene Location: 3090-3350 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, InsE (COG2963)

Seq: FUAH01000288.1 (2524 bp)
Overview 1 RT 1: 3-2067 bp Neighborhood of RT #1 [3, 2312] PHA02517 RVT-GII GIIM Feature: gene Location: 3-197 bp Feature: domain Description: PHA02517 Location: 6-132 bp Feature: domain Description: PHA02517 Location: 6-13 2 bp Feature: gene Location: 789-2312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1062-1794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1062-1794 bp Feature: domain Description: GIIM Note: maturase Location: 1869-2067 bp Feature: domain Description: GIIM Note: maturase Location: 1869-2067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: FUAH01000205.1 (5902 bp)
Overview 1 RT 1: 3378-5357 bp Neighborhood of RT #1 [3378, 5383] COG3547 RVT-GII GIIM RVT-GII Feature: gene Location: 3378-3863 bp Feature: domain Description: COG3547 Location: 3396-3828 bp Feature: domain Description: COG354 7 Location: 3396-3828 bp Feature: gene Location: 3959-4126 bp Feature: gene Location: 4152-4679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4158-4302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 158-4 302 bp Feature: domain Description: GIIM Note: maturase Location: 4380-4602 bp Feature: domain Description: GIIM Note: maturase Location: 4 380-4 602 bp Feature: gene Location: 4694-5383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4895-5357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 895-5357 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)