myRT

myRT report for GCA_900159675.1_8489_1_92

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Seq: FUAK01000034.1 (39334 bp)
Overview 1 RT 1: 1-3121 bp Neighborhood of RT #1 [1, 3147] DDE_Tnp_1 RVT-GII RVT-GII DUF1380 Feature: gene Location: 1-159 bp Feature: gene Location: 435-1217 bp Feature: domain Description: DDE_Tnp_1 Location: 441-1149 bp Feature: domain Description: DDE_Tnp_1 Location: 441 -1 1 49 bp Feature: gene Location: 1243-1446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1351-1441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 351 -1 441 bp Feature: gene Location: 1507-1776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1516-1627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 6-1 627 bp Feature: gene Location: 1892-2662 bp Feature: gene Location: 2713-3147 bp Feature: domain Description: DUF1380 Location: 2716-3121 bp Feature: domain Description: DUF1 380 Location: 271 6-31 21 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, DUF1380 (pfam07128)

Seq: FUAK01000206.1 (5919 bp)
Overview 1 RT 1: 3386-5365 bp Neighborhood of RT #1 [3386, 5391] COG3547 RVT-GII GIIM RVT-GII Feature: gene Location: 3386-3871 bp Feature: domain Description: COG3547 Location: 3404-3836 bp Feature: domain Description: COG3547 Location: 3404-3836 bp Feature: gene Location: 3967-4134 bp Feature: gene Location: 4160-4687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4166-4310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4166-4310 bp Feature: domain Description: GIIM Note: maturase Location: 4388-4610 bp Feature: domain Description: GIIM Note: maturase Location: 4388-4610 bp Feature: gene Location: 4702-5391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4903-5365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4903-5365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: FUAK01000280.1 (2782 bp)
Overview 1 RT 1: 1-2715 bp Neighborhood of RT #1 [1, 2780] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 1-273 bp Feature: domain Description: PHA02517 Location: 4-274 bp Feature: domain Description: PHA02517 Location: 4-274 bp Feature: gene Location: 390-1913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 663-1395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 663 -13 95 bp Feature: domain Description: GIIM Note: maturase Location: 1470-1668 bp Feature: domain Description: GIIM Note: maturase Location: 1470-1668 bp Feature: gene Location: 2505-2780 bp Feature: domain Description: PHA02517 Location: 2508-2715 bp Feature: domain Description: PHA02517 Location: 2508-2715 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: FUAK01000214.1 (5348 bp)
Overview 1 RT 1: 2368-5133 bp Neighborhood of RT #1 [2368, 5150] RVT-GII GIIM RVT-GII Tra5 Feature: gene Location: 2368-2610 bp Feature: gene Location: 2782-2937 bp Feature: gene Location: 2963-3490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2969-3113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2969-3113 bp Feature: domain Description: GIIM Note: maturase Location: 3197-3413 bp Feature: domain Description: GIIM Note: maturase Location: 3197-34 13 bp Feature: gene Location: 3500-3772 bp Feature: gene Location: 3789-4916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4089-4746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 089-4 74 6 bp Feature: gene Location: 4929-5150 bp Feature: domain Description: Tra5 Location: 4941-5133 bp Feature: domain Description: Tra5 Location: 4 94 1-5133 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Tra5 (COG2801)