myRT

myRT report for GCA_900159685.1_8489_1_93

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Seq: FUAL01000212.1 (5348 bp)
Overview 1 RT 1: 2368-5133 bp Neighborhood of RT #1 [2368, 5150] RVT-GII GIIM RVT-GII Tra5 Feature: gene Location: 2368-2610 bp Feature: gene Location: 2782-2937 bp Feature: gene Location: 2963-3490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2969-3113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2969-31 1 3 bp Feature: domain Description: GIIM Note: maturase Location: 3197-3413 bp Feature: domain Description: GIIM Note: maturase Location: 31 97-341 3 bp Feature: gene Location: 3500-3772 bp Feature: gene Location: 3789-4916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4089-4746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4089-4746 bp Feature: gene Location: 4929-5150 bp Feature: domain Description: Tra5 Location: 4941-5133 bp Feature: domain Description: Tra5 Location: 4941 -51 33 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Tra5 (COG2801)

Seq: FUAL01000280.1 (2782 bp)
Overview 1 RT 1: 1-2715 bp Neighborhood of RT #1 [1, 2780] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 1-273 bp Feature: domain Description: PHA02517 Location: 4-274 bp Feature: domain Description: PHA02 517 Location: 4-2 74 bp Feature: gene Location: 390-1913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 663-1395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 663-1395 bp Feature: domain Description: GIIM Note: maturase Location: 1470-1668 bp Feature: domain Description: GIIM Note: maturase Location: 1470-1668 bp Feature: gene Location: 2505-2780 bp Feature: domain Description: PHA02517 Location: 2508-2715 bp Feature: domain Description: PHA02 517 Location: 2 508-2 715 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: FUAL01000202.1 (6045 bp)
Overview 1 RT 1: 3492-5471 bp Neighborhood of RT #1 [3492, 5497] COG3547 RVT-GII GIIM RVT-GII Feature: gene Location: 3492-3977 bp Feature: domain Description: COG3547 Location: 3510-3942 bp Feature: domain Description: COG3 547 Location: 3 510-3 942 bp Feature: gene Location: 4073-4240 bp Feature: gene Location: 4266-4793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4272-4416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4272-4416 bp Feature: domain Description: GIIM Note: maturase Location: 4494-4716 bp Feature: domain Description: GIIM Note: maturase Location: 4494-4716 bp Feature: gene Location: 4808-5497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5009-5471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5009-5471 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: FUAL01000260.1 (3381 bp)
Overview 1 RT 1: 526-3049 bp Neighborhood of RT #1 [526, 3198] DDE_Tnp_1 RVT-GII RVT-GII HTH_23 InsE Feature: gene Location: 526-747 bp Feature: gene Location: 1023-1805 bp Feature: domain Description: DDE_Tnp_1 Location: 1029-1737 bp Feature: domain Description: DDE_Tnp_1 Location: 1029-1737 bp Feature: gene Location: 1831-2034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1939-2029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1939-2029 bp Feature: gene Location: 2095-2451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2104-2425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2104 -24 25 bp Feature: gene Location: 2545-3198 bp Feature: domain Description: HTH_23 Location: 2638-2725 bp Feature: domain Description: HTH_23 Location: 2638-2725 bp Feature: domain Description: InsE Location: 2854-3049 bp Feature: domain Description: InsE Location: 2854 -304 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, HTH_23 (pfam13384), InsE (COG2963)