myRT

myRT report for GCA_900159695.1_8489_1_94

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Seq: FUAN01000206.1 (5920 bp)
Overview 1 RT 1: 530-2500 bp Neighborhood of RT #1 [530, 2535] RVT-GII RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 530-1219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 731-1193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 731 -1 1 93 bp Feature: gene Location: 1234-1761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1240-1384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 240-1 384 bp Feature: domain Description: GIIM Note: maturase Location: 1462-1684 bp Feature: domain Description: GIIM Note: maturase Location: 1 462-1 684 bp Feature: gene Location: 1877-2023 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1889-2000 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 889-2000 bp Feature: gene Location: 2050-2535 bp Feature: domain Description: COG3547 Location: 2068-2500 bp Feature: domain Description: COG3547 Location: 2068-2500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase )

Seq: FUAN01000157.1 (8606 bp)
Overview 1 RT 1: 5255-8539 bp Neighborhood of RT #1 [5255, 8604] PRK13734 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 5255-5536 bp Feature: domain Description: PRK13734 Location: 5258-5534 bp Feature: domain Description: PRK13734 Location: 52 58-5534 bp Feature: gene Location: 5651-6097 bp Feature: domain Description: PHA02517 Location: 5654-6095 bp Feature: domain Description: PHA02 517 Location: 5654-6095 bp Feature: gene Location: 6214-7737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6487-7219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6487-72 19 bp Feature: domain Description: GIIM Note: maturase Location: 7294-7492 bp Feature: domain Description: GIIM Note: maturase Location: 72 94-7492 bp Feature: gene Location: 8329-8604 bp Feature: domain Description: PHA02517 Location: 8332-8539 bp Feature: domain Description: PHA02 517 Location: 8332 -8539 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13734 (conjugal transfer pilin subunit TraA; Provisional), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: FUAN01000263.1 (3351 bp)
Overview 1 RT 1: 526-3350 bp Neighborhood of RT #1 [526, 3350] DDE_Tnp_1 RVT-GII RVT-GII InsE Feature: gene Location: 526-747 bp Feature: gene Location: 1023-1805 bp Feature: domain Description: DDE_Tnp_1 Location: 1029-1737 bp Feature: domain Description: DDE_Tnp_1 Location: 1029-173 7 bp Feature: gene Location: 1831-2034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1939-2029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 193 9-2029 bp Feature: gene Location: 2095-2451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2104-2425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2104-2425 bp Feature: gene Location: 2545-3048 bp Feature: domain Description: InsE Location: 2704-2902 bp Feature: domain Description: InsE Location: 2704-2902 bp Feature: gene Location: 3090-3350 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, InsE (COG2963)

Seq: FUAN01000215.1 (5330 bp)
Overview 1 RT 1: 2350-5115 bp Neighborhood of RT #1 [2350, 5132] RVT-GII GIIM RVT-GII Tra5 Feature: gene Location: 2350-2592 bp Feature: gene Location: 2764-2919 bp Feature: gene Location: 2945-3472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2951-3095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2951-3095 bp Feature: domain Description: GIIM Note: maturase Location: 3179-3395 bp Feature: domain Description: GIIM Note: maturase Location: 3179-3395 bp Feature: gene Location: 3482-3754 bp Feature: gene Location: 3771-4898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4071-4728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 071-4 728 bp Feature: gene Location: 4911-5132 bp Feature: domain Description: Tra5 Location: 4923-5115 bp Feature: domain Description: Tra5 Location: 4 923-5115 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Tra5 (COG2801)