myRT

myRT report for GCA_900159715.1_8403_8_1

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Seq: FUAO01000200.1 (5927 bp)
Overview 1 RT 1: 537-2507 bp Neighborhood of RT #1 [537, 2542] RVT-GII RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 537-1226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 738-1200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 738-1 200 bp Feature: gene Location: 1241-1768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1247-1391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 247-1 391 bp Feature: domain Description: GIIM Note: maturase Location: 1469-1691 bp Feature: domain Description: GIIM Note: maturase Location: 1 469-1 691 bp Feature: gene Location: 1884-2030 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1896-2007 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 896-2007 bp Feature: gene Location: 2057-2542 bp Feature: domain Description: COG3547 Location: 2075-2507 bp Feature: domain Description: COG3547 Location: 2075-2507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase )

Seq: FUAO01000261.1 (3347 bp)
Overview 1 RT 1: 518-3345 bp Neighborhood of RT #1 [518, 3345] DDE_Tnp_1 RVT-GII RVT-GII InsE Feature: gene Location: 518-739 bp Feature: gene Location: 1015-1797 bp Feature: domain Description: DDE_Tnp_1 Location: 1021-1729 bp Feature: domain Description: DDE_Tnp_1 Location: 102 1-172 9 bp Feature: gene Location: 1823-2026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1931-2021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1931-2 02 1 bp Feature: gene Location: 2087-2443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2096-2417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 096-2 417 bp Feature: gene Location: 2537-3040 bp Feature: domain Description: InsE Location: 2696-2894 bp Feature: domain Description: InsE Location: 2 696-2 894 bp Feature: gene Location: 3082-3345 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, InsE (COG2963)

Seq: FUAO01000287.1 (2640 bp)
Overview 1 RT 1: 1-2575 bp Neighborhood of RT #1 [1, 2575] PHA02517 RVT-GII GIIM Feature: gene Location: 1-270 bp Feature: domain Description: PHA02517 Location: 4-271 bp Feature: domain Description: PHA02517 Location: 4-271 bp Feature: gene Location: 387-1910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 660-1392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 660-13 92 bp Feature: domain Description: GIIM Note: maturase Location: 1467-1665 bp Feature: domain Description: GIIM Note: maturase Location: 1467-1665 bp Feature: gene Location: 2204-2575 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: FUAO01000210.1 (5336 bp)
Overview 1 RT 1: 187-4498 bp Neighborhood of RT #1 [187, 4500] Tra5 RVT-GII RVT-GII GIIM ushA Feature: gene Location: 187-408 bp Feature: domain Description: Tra5 Location: 199-391 bp Feature: domain Description: Tra5 Location: 199-391 bp Feature: gene Location: 421-1548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 721-1378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 721-1378 bp Feature: gene Location: 1847-2374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1853-1997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1853-1997 bp Feature: domain Description: GIIM Note: maturase Location: 2081-2297 bp Feature: domain Description: GIIM Note: maturase Location: 2081-2297 bp Feature: gene Location: 2727-2969 bp Feature: gene Location: 2881-4500 bp Feature: domain Description: ushA Location: 2896-4498 bp Feature: domain Description: ushA Location: 2896-4 4 98 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), ushA (PRK09558)