myRT

myRT report for GCA_900160485.1_8403_8_84

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Seq: FUDT01000164.1 (8257 bp)
Overview 1 RT 1: 6204-8255 bp Neighborhood of RT #1 [6204, 8255] PHA02517 PHA02517 RVT-GII Feature: gene Location: 6204-6767 bp Feature: domain Description: PHA02517 Location: 6264-6570 bp Feature: domain Description: PHA0251 7 Location: 6264-6570 bp Feature: gene Location: 6773-6982 bp Feature: domain Description: PHA02517 Location: 6866-6938 bp Feature: domain Description: PHA0251 7 Location: 6866-6938 bp Feature: gene Location: 7129-7368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7135-7342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 35-7342 bp Feature: gene Location: 7462-7800 bp Feature: gene Location: 8088-8255 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII

Seq: FUDT01000192.1 (5877 bp)
Overview 1 RT 1: 3350-5329 bp Neighborhood of RT #1 [3350, 5355] COG3547 RVT-GII GIIM RVT-GII Feature: gene Location: 3350-3835 bp Feature: domain Description: COG3547 Location: 3368-3800 bp Feature: domain Description: COG3547 Location: 3368-3800 bp Feature: gene Location: 3931-4098 bp Feature: gene Location: 4124-4651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4130-4274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4130-42 74 bp Feature: domain Description: GIIM Note: maturase Location: 4352-4574 bp Feature: domain Description: GIIM Note: maturase Location: 4352 -4574 bp Feature: gene Location: 4666-5355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4867-5329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4867-532 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: FUDT01000084.1 (18202 bp)
Overview 1 RT 1: 8620-11985 bp Neighborhood of RT #1 [8620, 12050] GrsT PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 8620-8901 bp Feature: domain Description: GrsT Location: 8623-8881 bp Feature: domain Description: GrsT Location: 8623 -8881 bp Feature: gene Location: 8947-9393 bp Feature: domain Description: PHA02517 Location: 8950-9391 bp Feature: domain Description: PHA02517 Location: 8950-93 91 bp Feature: gene Location: 9510-11033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9783-10515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9783 -10515 bp Feature: domain Description: GIIM Note: maturase Location: 10590-10788 bp Feature: domain Description: GIIM Note: maturase Location: 10590-10788 bp Feature: gene Location: 10987-11412 bp Feature: gene Location: 11625-12050 bp Feature: domain Description: PHA02517 Location: 11649-11985 bp Feature: domain Description: PHA02517 Location: 11649-11985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GrsT (COG3208), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: FUDT01000202.1 (5163 bp)
Overview 1 RT 1: 69-4413 bp Neighborhood of RT #1 [69, 4415] Tra5 RVT-GII RVT-GII GIIM ushA Feature: gene Location: 69-323 bp Feature: domain Description: Tra5 Location: 108-306 bp Feature: domain Description: Tra5 Location: 108-306 bp Feature: gene Location: 336-1463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 636-1293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 636-1293 bp Feature: gene Location: 1762-2289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1768-1912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1768-1912 bp Feature: domain Description: GIIM Note: maturase Location: 1996-2212 bp Feature: domain Description: GIIM Note: maturase Location: 1996-2212 bp Feature: gene Location: 2642-2884 bp Feature: gene Location: 2796-4415 bp Feature: domain Description: ushA Location: 2811-4413 bp Feature: domain Description: ushA Location: 2811-4 4 13 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), ushA (PRK09558)