myRT

myRT report for GCA_900162665.1_PRJEB6467

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Seq: LT727813.1 (1178197 bp)
Overview 1 RT 1: 37999-40328 bp 2 RT 2: 47079-51316 bp Neighborhood of RT #1 [37999, 40342] RVT-Retrons MFS_MMR_MDR_like Neighborhood of RT #2 [47079, 51316] TTHA0252-CPSF-like_MBL-fold CYTH-like_AC_IV-like RVT-GII GIIM ChrA Feature: gene Location: 37999-38241 bp Feature: gene Location: 38417-38548 bp Feature: gene Location: 38981-39268 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39029-39257 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39029-39257 bp Feature: gene Location: 39407-39550 bp Feature: gene Location: 40133-40342 bp Feature: domain Description: MFS_MMR_MDR_like Location: 40139-40328 bp Feature: domain Description: MFS_MMR_MDR_like Location: 401 39-40328 bp Feature: gene Location: 47079-47912 bp Feature: domain Description: TTHA0252-CPSF-like_MBL-fold Location: 47193-47388 bp Feature: domain Description: TTHA0252-CPSF-like_MBL-fold Location: 471 93-47388 bp Feature: gene Location: 47909-48703 bp Feature: domain Description: CYTH-like_AC_IV-like Location: 48008-48203 bp Feature: domain Description: CYTH-like_AC_IV-like Location: 48008-48203 bp Feature: gene Location: 48778-50112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49045-49660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49045-49660 bp Feature: domain Description: GIIM Note: maturase Location: 49723-49936 bp Feature: domain Description: GIIM Note: maturase Location: 49723-49936 bp Feature: gene Location: 50434-50562 bp Feature: domain Description: ChrA Location: 50443-50557 bp Feature: domain Description: ChrA Location: 50443-50557 bp Feature: gene Location: 51131-51316 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, MFS_MMR_MDR_like (cd17504), TTHA0252-CPSF-like_MBL-fold (cd16295), CYTH-like_AC_IV-like (cd07890), RVT-GII, GIIM (pfam08388), ChrA (COG2059)

Seq: LT727810.1 (788644 bp)
Overview 1 RT 1: 93720-100318 bp Neighborhood of RT #1 [93720, 100908] AAT URO-D_like RVT-UG2 DDE_5 Feature: gene Location: 93720-94823 bp Feature: domain Description: AAT Location: 94074-94761 bp Feature: domain Description: AAT Location: 94074-94761 bp Feature: gene Location: 94937-95839 bp Feature: domain Description: URO-D_like Location: 94943-95774 bp Feature: domain Description: URO-D_like Location: 94943-95774 bp Feature: gene Location: 96582-97928 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 96780-97605 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 96780-97605 bp Feature: gene Location: 98077-99420 bp Feature: gene Location: 99547-100908 bp Feature: domain Description: DDE_5 Location: 99763-100318 bp Feature: domain Description: DDE_5 Location: 99763-100318 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAT (pfam03417), URO-D_like (cd03465), RVT-UG2, DDE_5 (pfam13546)