myRT

myRT report for GCA_900162735.1_8489_1_72

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Seq: FUFW01000211.1 (5348 bp)
Overview 1 RT 1: 2368-5133 bp Neighborhood of RT #1 [2368, 5150] RVT-GII GIIM RVT-GII Tra5 Feature: gene Location: 2368-2610 bp Feature: gene Location: 2782-2937 bp Feature: gene Location: 2963-3490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2969-3113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2969-31 1 3 bp Feature: domain Description: GIIM Note: maturase Location: 3197-3413 bp Feature: domain Description: GIIM Note: maturase Location: 31 97-341 3 bp Feature: gene Location: 3500-3772 bp Feature: gene Location: 3789-4916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4089-4746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4089-4746 bp Feature: gene Location: 4929-5150 bp Feature: domain Description: Tra5 Location: 4941-5133 bp Feature: domain Description: Tra5 Location: 4941 -51 33 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Tra5 (COG2801)

Seq: FUFW01000205.1 (5951 bp)
Overview 1 RT 1: 561-2531 bp Neighborhood of RT #1 [561, 2566] RVT-GII RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 561-1250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762-1224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762 -12 2 4 bp Feature: gene Location: 1265-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1271-1415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 71-1415 bp Feature: domain Description: GIIM Note: maturase Location: 1493-1715 bp Feature: domain Description: GIIM Note: maturase Location: 1493-1715 bp Feature: gene Location: 1908-2054 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1920-2031 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 192 0-2 031 bp Feature: gene Location: 2081-2566 bp Feature: domain Description: COG3547 Location: 2099-2531 bp Feature: domain Description: COG3547 Location: 2 099-2 531 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase )

Seq: FUFW01000259.1 (3354 bp)
Overview 1 RT 1: 526-3353 bp Neighborhood of RT #1 [526, 3353] DDE_Tnp_1 RVT-GII RVT-GII InsE Feature: gene Location: 526-747 bp Feature: gene Location: 1023-1805 bp Feature: domain Description: DDE_Tnp_1 Location: 1029-1737 bp Feature: domain Description: DDE_Tnp_1 Location: 1029-173 7 bp Feature: gene Location: 1831-2034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1939-2029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 193 9-2029 bp Feature: gene Location: 2095-2451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2104-2425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2104-2425 bp Feature: gene Location: 2545-3048 bp Feature: domain Description: InsE Location: 2704-2902 bp Feature: domain Description: InsE Location: 2704-2902 bp Feature: gene Location: 3090-3353 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, InsE (COG2963)

Seq: FUFW01000138.1 (10911 bp)
Overview 1 RT 1: 3-3329 bp Neighborhood of RT #1 [3, 3337] PHA02517 RVT-GII GIIM PHA02517 Inovirus_Gp2 Feature: gene Location: 3-278 bp Feature: domain Description: PHA02517 Location: 6-213 bp Feature: domain Description: PHA02517 Location: 6-213 bp Feature: gene Location: 870-2393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1143-1875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114 3-1875 bp Feature: domain Description: GIIM Note: maturase Location: 1950-2148 bp Feature: domain Description: GIIM Note: maturase Location: 1950-214 8 bp Feature: gene Location: 2510-2956 bp Feature: domain Description: PHA02517 Location: 2513-2954 bp Feature: domain Description: PHA02517 Location: 2513-2954 bp Feature: gene Location: 2996-3337 bp Feature: domain Description: Inovirus_Gp2 Location: 3065-3329 bp Feature: domain Description: Inovirus_Gp2 Location: 3065-3329 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Inovirus_Gp2 (pfam11726)