myRT

myRT report for GCA_900163915.1_V_gazogenes_CECT5068T_Velvet_Prokka_EMBL

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Seq: FULF01000063.1 (57839 bp)
Overview 1 RT 1: 36670-42576 bp Neighborhood of RT #1 [36670, 42576] Csx1_III-U DUF1874 CRISPR_Cas6 RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 36670-38556 bp Feature: domain Description: Csx1_III-U Location: 38329-38503 bp Feature: domain Description: Csx1 _III-U Location: 38329-38503 bp Feature: gene Location: 38561-38878 bp Feature: domain Description: DUF1874 Location: 38570-38807 bp Feature: domain Description: DUF1 874 Location: 38570-38807 bp Feature: gene Location: 38978-42028 bp Feature: domain Description: CRISPR_Cas6 Location: 39554-39827 bp Feature: domain Description: CRISPR_Cas6 Location: 39554-39827 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 40055-40643 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 40055-40643 bp Feature: domain Description: Cas1_I-II-III Location: 41078-41993 bp Feature: domain Description: Cas1 _I-II-III Location: 41 078-41 993 bp Feature: gene Location: 42013-42306 bp Feature: domain Description: Cas2_I_II_III Location: 42037-42268 bp Feature: domain Description: Cas2_I_II_III Location: 42037-42268 bp Feature: gene Location: 42361-42576 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Csx1_III-U (cl21570), DUF1874 (pfam08960), CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: FULF01000134.1 (25600 bp)
Overview 1 RT 1: 8327-11274 bp Neighborhood of RT #1 [8327, 12392] HTH_XRE RVT-Retrons Peptidase_C39_2 Feature: gene Location: 8327-8560 bp Feature: gene Location: 8612-8896 bp Feature: domain Description: HTH_XRE Location: 8624-8789 bp Feature: domain Description: HTH_XRE Location: 862 4-8789 bp Feature: gene Location: 8959-9846 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9028-9601 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 902 8-9601 bp Feature: gene Location: 10130-10288 bp Feature: gene Location: 10344-12392 bp Feature: domain Description: Peptidase_C39_2 Location: 10845-11274 bp Feature: domain Description: Peptidase_C39_2 Location: 10845-112 74 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, Peptidase_C39_2 (pfam13529)

Seq: FULF01000001.1 (96519 bp)
Overview 1 RT 1: 48576-56171 bp Neighborhood of RT #1 [48576, 56171] Csm3_III-A Csm3_III-A Csm3_III-A Csm3_III-A TIGR03986 CRISPR_Cas6 RVT-CRISPR Cas_Cas1 CRISPR_Cas2 Feature: gene Location: 48576-50132 bp Feature: domain Description: Csm3_III-A Location: 48597-48771 bp Feature: domain Description: Csm3 _III-A Location: 48597-48771 bp Feature: domain Description: Csm3_III-A Location: 48915-49203 bp Feature: domain Description: Csm3 _III-A Location: 48915-49203 bp Feature: domain Description: Csm3_III-A Location: 49461-49575 bp Feature: domain Description: Csm3 _III-A Location: 49461-49575 bp Feature: domain Description: Csm3_III-A Location: 49608-49932 bp Feature: domain Description: Csm3 _III-A Location: 49608-4993 2 bp Feature: gene Location: 50134-52554 bp Feature: domain Description: TIGR03986 Location: 50158-52222 bp Feature: domain Description: TIGR03 986 Location: 50158-52222 bp Feature: gene Location: 52560-55391 bp Feature: domain Description: CRISPR_Cas6 Location: 53055-53439 bp Feature: domain Description: CRISPR_Cas6 Location: 53 055-53 43 9 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 53661-54264 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 53 661-54264 bp Feature: domain Description: Cas_Cas1 Location: 54444-55263 bp Feature: domain Description: Cas_Cas1 Location: 54444-55263 bp Feature: gene Location: 55411-55689 bp Feature: domain Description: CRISPR_Cas2 Location: 55420-55612 bp Feature: domain Description: CRISPR_Cas2 Location: 55420-55612 bp Feature: gene Location: 56022-56171 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Csm3_III-A (cd09684), TIGR03986 (CRISPR-associated protein), CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cas_Cas1 (pfam01867), CRISPR_Cas2 (pfam09827)