myRT

myRT report for GCA_900167045.1_IMG-taxon_2585428143_annotated_assembly

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Seq: FUXJ01000014.1 (113919 bp)
Overview 1 RT 1: 2830-9492 bp Neighborhood of RT #1 [2830, 9554] DDE_Tnp_IS66_C group_II_RT_mat RVT-GII KOG0713 AHH Feature: gene Location: 2830-3225 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3034-3145 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3034-31 45 bp Feature: gene Location: 3624-3911 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3753-3909 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3753-3909 bp Feature: gene Location: 3996-4178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4002-4161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4002-41 61 bp Feature: gene Location: 4327-5805 bp Feature: gene Location: 5820-9554 bp Feature: domain Description: KOG0713 Location: 5823-6054 bp Feature: domain Description: KOG071 3 Location: 5823-6054 bp Feature: domain Description: AHH Location: 9180-9492 bp Feature: domain Description: AHH Location: 91 80-9492 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), group_II_RT_mat (TIGR04416), RVT-GII, KOG0713 (KOG0713, Molecular chaperone (DnaJ superfamily) ), AHH (pfam14412)

Seq: FUXJ01000023.1 (42755 bp)
Overview 1 RT 1: 37573-42738 bp Neighborhood of RT #1 [37573, 42752] WGR_MMR_like DUF772 RVT-DGRs Avd_like DUF1566 Feature: gene Location: 37573-38040 bp Feature: domain Description: WGR_MMR_like Location: 37657-37846 bp Feature: domain Description: WGR_MMR_like Location: 37657-37846 bp Feature: gene Location: 38378-39838 bp Feature: domain Description: DUF772 Location: 38561-38753 bp Feature: domain Description: DUF772 Location: 38561-38753 bp Feature: gene Location: 39857-41056 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 40076-40775 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 40076-40775 bp Feature: gene Location: 41388-41741 bp Feature: domain Description: Avd_like Location: 41415-41721 bp Feature: domain Description: Avd_like Location: 41415-4172 1 bp Feature: gene Location: 41820-42752 bp Feature: domain Description: DUF1566 Location: 42522-42738 bp Feature: domain Description: DUF1566 Location: 42 52 2 -42 738 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR_MMR_like (cd07996), DUF772 (pfam05598), RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)

Seq: FUXJ01000022.1 (46177 bp)
Overview 1 RT 1: 8321-12427 bp Neighborhood of RT #1 [8321, 12588] TnpB_IS66 COG3436 RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 8321-8674 bp Feature: domain Description: TnpB_IS66 Location: 8348-8636 bp Feature: domain Description: TnpB_IS66 Location: 83 48-863 6 bp Feature: gene Location: 8812-9558 bp Feature: domain Description: COG3436 Location: 9049-9514 bp Feature: domain Description: COG3 43 6 Location: 9049-9514 bp Feature: gene Location: 9990-11297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10275-10914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10275-10914 bp Feature: domain Description: GIIM Note: maturase Location: 10986-11214 bp Feature: domain Description: GIIM Note: maturase Location: 10986-11214 bp Feature: gene Location: 11278-11649 bp Feature: gene Location: 11656-12588 bp Feature: domain Description: DDE_Tnp_1 Location: 11923-12427 bp Feature: domain Description: DDE_Tnp_1 Location: 11923 -12427 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), COG3436 (Transposase ), RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609)