myRT

myRT report for GCA_900167275.1_IMG-taxon_2585428148_annotated_assembly

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Seq: FUWX01000004.1 (394203 bp)
Overview 1 RT 1: 277100-281850 bp 2 RT 2: 313940-317138 bp Neighborhood of RT #1 [277100, 281969] DUF4956 RVT-GII Intron_maturas2 HNHc PsuG Neighborhood of RT #2 [313940, 317185] PIN_LabA Prok-E2_E RVT-CRISPR Cas1_I-II-III Cas2 Feature: gene Location: 277100-277789 bp Feature: domain Description: DUF4956 Location: 277241-277619 bp Feature: domain Description: DUF4956 Location: 277241 -27761 9 bp Feature: gene Location: 277869-278339 bp Feature: gene Location: 278383-280185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 278647-279478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 278647-279478 bp Feature: domain Description: Intron_maturas2 Location: 279592-279847 bp Feature: domain Description: Intron_maturas2 Location: 279592-279847 bp Feature: domain Description: HNHc Note: nucleases Location: 280027-280165 bp Feature: domain Description: HNHc Note: nucleases Location: 280027-2801 65 bp Feature: gene Location: 280767-281027 bp Feature: gene Location: 281163-281969 bp Feature: domain Description: PsuG Location: 281178-281850 bp Feature: domain Description: PsuG Location: 281 1 78-281 850 bp Feature: gene Location: 313940-314434 bp Feature: domain Description: PIN_LabA Location: 313946-314393 bp Feature: domain Description: PIN_LabA Location: 31 3946-31 4393 bp Feature: gene Location: 314436-315104 bp Feature: domain Description: Prok-E2_E Location: 314745-315090 bp Feature: domain Description: Prok-E2_E Location: 31 4745-31 5090 bp Feature: gene Location: 315107-315940 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 315299-315917 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 31 5299-31 591 7 bp Feature: gene Location: 315946-316896 bp Feature: domain Description: Cas1_I-II-III Location: 315949-316870 bp Feature: domain Description: Cas1 _I-II-III Location: 31 5949-31 6870 bp Feature: gene Location: 316898-317185 bp Feature: domain Description: Cas2 Location: 316901-317138 bp Feature: domain Description: Cas2 Location: 31 6901 -31 71 38 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4956 (pfam16316), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PsuG (COG2313), PIN_LabA (cd10911), Prok-E2_E (pfam14462), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2 (COG3512)