myRT

myRT report for GCA_900167965.1_IMG-taxon_2711768613_annotated_assembly

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Seq: FUZW01000002.1 (3974063 bp)
Overview 1 RT 1: 1799588-1804883 bp 2 RT 2: 2566270-2574039 bp 3 RT 3: 3126057-3132444 bp 4 RT 4: 3213922-3220861 bp 5 RT 5: 3719827-3726932 bp Neighborhood of RT #1 [1799588, 1804883] groEL groES RVT-GII Neighborhood of RT #2 [2566270, 2574068] LbH_AT_putative CytC5 CytC5 RVT-GII GIIM rep PRK11579 Neighborhood of RT #3 [3126057, 3132479] ubiB TPMT RVT_N RVT-GII GIIM HNHc COG2331 COG2928 Neighborhood of RT #4 [3213922, 3220866] R_switched_YjbE PilA RVT_N RVT-GII GIIM HNHc PglL_A Wzy_C Wzy_C_2 moaC Neighborhood of RT #5 [3719827, 3726949] EarP RVT_N RVT-GII GIIM HNHc uvrC PRK10832 Feature: gene Location: 1799588-1801228 bp Feature: domain Description: groEL Location: 1799591-1801217 bp Feature: domain Description: groEL Location: 1 799591 -1 801 21 7 bp Feature: gene Location: 1801272-1801562 bp Feature: domain Description: groES Location: 1801275-1801557 bp Feature: domain Description: groES Location: 1 801 275-1 801 557 bp Feature: gene Location: 1802041-1802862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1802683-1802818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 802683-1 80281 8 bp Feature: gene Location: 1803110-1803598 bp Feature: gene Location: 1804671-1804883 bp Feature: gene Location: 2566270-2566944 bp Feature: domain Description: LbH_AT_putative Location: 2566303-2566900 bp Feature: domain Description: LbH_AT_putative Location: 2566303-2566900 bp Feature: gene Location: 2567632-2568564 bp Feature: domain Description: CytC5 Location: 2567791-2568100 bp Feature: domain Description: CytC5 Location: 2567791 -25681 00 bp Feature: domain Description: CytC5 Location: 2568211-2568559 bp Feature: domain Description: CytC5 Location: 256821 1 -2568559 bp Feature: gene Location: 2569090-2570457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2569417-2570038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 256941 7-2570038 bp Feature: domain Description: GIIM Note: maturase Location: 2570089-2570293 bp Feature: domain Description: GIIM Note: maturase Location: 2570089-2570293 bp Feature: gene Location: 2570582-2572669 bp Feature: domain Description: rep Location: 2570597-2572586 bp Feature: domain Description: rep Location: 2570597-2572586 bp Feature: gene Location: 2573019-2574068 bp Feature: domain Description: PRK11579 Location: 2573022-2574039 bp Feature: domain Description: PRK1 1 579 Location: 2573022-2574039 bp Feature: gene Location: 3126057-3127640 bp Feature: domain Description: ubiB Location: 3126060-3127620 bp Feature: domain Description: ubiB Location: 31 26060-31 27620 bp Feature: gene Location: 3127663-3128310 bp Feature: domain Description: TPMT Location: 3127732-3128278 bp Feature: domain Description: TPMT Location: 31 27732-31 28278 bp Feature: gene Location: 3129661-3131262 bp Feature: domain Description: RVT_N Location: 3129664-3129862 bp Feature: domain Description: RVT_N Location: 31 29664-31 29862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3129907-3130555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 29907-31 30555 bp Feature: domain Description: GIIM Note: maturase Location: 3130612-3130840 bp Feature: domain Description: GIIM Note: maturase Location: 31 3061 2-31 30840 bp Feature: domain Description: HNHc Note: nucleases Location: 3131065-3131224 bp Feature: domain Description: HNHc Note: nucleases Location: 31 31 065-31 31 224 bp Feature: gene Location: 3131396-3131755 bp Feature: domain Description: COG2331 Location: 3131399-3131618 bp Feature: domain Description: COG2331 Location: 31 31 399-31 31 61 8 bp Feature: gene Location: 3131823-3132479 bp Feature: domain Description: COG2928 Location: 3131838-3132444 bp Feature: domain Description: COG2928 Location: 31 31 838-31 32444 bp Feature: gene Location: 3213922-3214647 bp Feature: domain Description: R_switched_YjbE Location: 3213958-3214495 bp Feature: domain Description: R_switched_YjbE Location: 321 3958-321 4495 bp Feature: gene Location: 3214786-3215403 bp Feature: domain Description: PilA Location: 3214900-3215131 bp Feature: domain Description: PilA Location: 321 4900-321 51 31 bp Feature: gene Location: 3216764-3218371 bp Feature: domain Description: RVT_N Location: 3216767-3216965 bp Feature: domain Description: RVT_N Location: 321 6767-321 6965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3217010-3217658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321 701 0-321 7658 bp Feature: domain Description: GIIM Note: maturase Location: 3217709-3217943 bp Feature: domain Description: GIIM Note: maturase Location: 321 7709-321 7943 bp Feature: domain Description: HNHc Note: nucleases Location: 3218186-3218327 bp Feature: domain Description: HNHc Note: nucleases Location: 321 81 86-321 8327 bp Feature: gene Location: 3218496-3220286 bp Feature: domain Description: PglL_A Location: 3219003-3219075 bp Feature: domain Description: PglL_A Location: 321 9003-321 9075 bp Feature: domain Description: Wzy_C Location: 3219117-3219585 bp Feature: domain Description: Wzy_C Location: 321 91 1 7-321 9585 bp Feature: domain Description: Wzy_C_2 Location: 3219651-3220155 bp Feature: domain Description: Wzy_C_2 Location: 321 9651 -32201 55 bp Feature: gene Location: 3220390-3220866 bp Feature: domain Description: moaC Location: 3220396-3220861 bp Feature: domain Description: moaC Location: 3220396-3220861 bp Feature: gene Location: 3719827-3721008 bp Feature: domain Description: EarP Location: 3719875-3720991 bp Feature: domain Description: EarP Location: 371 9875-3720991 bp Feature: gene Location: 3722046-3722204 bp Feature: gene Location: 3722302-3723903 bp Feature: domain Description: RVT_N Location: 3722305-3722503 bp Feature: domain Description: RVT_N Location: 3722305-3722503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3722548-3723196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3722548-37231 96 bp Feature: domain Description: GIIM Note: maturase Location: 3723250-3723481 bp Feature: domain Description: GIIM Note: maturase Location: 3723250-3723481 bp Feature: domain Description: HNHc Note: nucleases Location: 3723712-3723865 bp Feature: domain Description: HNHc Note: nucleases Location: 372371 2-3723865 bp Feature: gene Location: 3724056-3726248 bp Feature: domain Description: uvrC Location: 3724146-3726246 bp Feature: domain Description: uvrC Location: 37241 46-3726246 bp Feature: gene Location: 3726359-3726949 bp Feature: domain Description: PRK10832 Location: 3726362-3726932 bp Feature: domain Description: PRK1 0832 Location: 3726362-3726932 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groEL (PRK12852), groES (PRK14533), RVT-GII, LbH_AT_putative (cd03360), CytC5 (COG3245), GIIM (pfam08388), rep (TIGR01074), PRK11579 (putative oxidoreductase; Provisional), ubiB (PRK04750), TPMT (pfam05724)
RVT_N (pfam13655), HNHc (smart00507), COG2331 (Predicted nucleic acid-binding protein, contains Zn-ribbon domain ), COG2928 (Uncharacterized membrane protein ), R_switched_YjbE (TIGR03717), PilA (COG4969), PglL_A (pfam15864), Wzy_C (pfam04932), Wzy_C_2 (pfam11846), moaC (TIGR00581)
EarP (TIGR03837), uvrC (TIGR00194), PRK10832 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase)

Seq: FUZW01000001.1 (4460025 bp)
Overview 1 RT 1: 1051996-1060049 bp Neighborhood of RT #1 [1051996, 1060049] DDE_Tnp_IS1595 RVT-UG7 ABC_ATPase AAA_21 Feature: gene Location: 1051996-1052787 bp Feature: domain Description: DDE_Tnp_IS1595 Location: 1052194-1052653 bp Feature: domain Description: DDE_Tnp_IS1595 Location: 1052 194-1052 653 bp Feature: gene Location: 1053160-1053465 bp Feature: gene Location: 1053966-1055537 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1054335-1054752 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1054335-1054752 bp Feature: gene Location: 1056542-1058962 bp Feature: domain Description: ABC_ATPase Location: 1057907-1057991 bp Feature: domain Description: ABC_ATPase Location: 1057907-1057991 bp Feature: domain Description: AAA_21 Location: 1058327-1058624 bp Feature: domain Description: AAA_2 1 Location: 105832 7-105862 4 bp Feature: gene Location: 1059264-1060049 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1595 (pfam12762), RVT-UG7, ABC_ATPase (pfam09818), AAA_21 (pfam13304)