myRT

myRT report for GCA_900168115.1_IMG-taxon_2595698206_annotated_assembly

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Seq: FUZC01000016.1 (72233 bp)
Overview 1 RT 1: 50968-56255 bp Neighborhood of RT #1 [50968, 56272] REC sensory_box NhaP RVT-GII RVT-GII TPR TPR Feature: gene Location: 50968-51969 bp Feature: domain Description: REC Location: 50998-51307 bp Feature: domain Description: REC Location: 50998-51 307 bp Feature: domain Description: sensory_box Location: 51379-51742 bp Feature: domain Description: sensory_box Location: 51 379-51 742 bp Feature: gene Location: 51994-53214 bp Feature: domain Description: NhaP Location: 52000-53203 bp Feature: domain Description: NhaP Location: 52000-53203 bp Feature: gene Location: 54080-54289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54104-54272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 541 04-54272 bp Feature: gene Location: 54286-54675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54505-54658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54505-54658 bp Feature: gene Location: 54706-54885 bp Feature: gene Location: 55034-56272 bp Feature: domain Description: TPR Location: 55466-55847 bp Feature: domain Description: TPR Location: 55466-55847 bp Feature: domain Description: TPR Location: 55907-56255 bp Feature: domain Description: TPR Location: 55907-56255 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT REC (smart00448), sensory_box (TIGR00229), NhaP (COG0025), RVT-GII, TPR (smart00028)

Seq: FUZC01000005.1 (295412 bp)
Overview 1 RT 1: 291805-295231 bp Neighborhood of RT #1 [291805, 295410] M3A_DCP RVT-GII GIIM Feature: gene Location: 291805-293949 bp Feature: domain Description: M3A_DCP Location: 291976-293929 bp Feature: domain Description: M3A_DCP Location: 2 91976-2 9392 9 bp Feature: gene Location: 294027-294623 bp Feature: gene Location: 294832-295410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 294835-294964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 94835-2 94964 bp Feature: domain Description: GIIM Note: maturase Location: 295018-295231 bp Feature: domain Description: GIIM Note: maturase Location: 2 95018-2 952 31 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT M3A_DCP (cd06456), RVT-GII, GIIM (pfam08388)

Seq: FUZC01000025.1 (35795 bp)
Overview 1 RT 1: 2-3249 bp Neighborhood of RT #1 [2, 3257] group_II_RT_mat RVT-GII GIIM COG3177 Feature: gene Location: 2-148 bp Feature: gene Location: 227-502 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 278-485 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 278-485 bp Feature: gene Location: 508-1485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 511-1105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 511-1105 bp Feature: domain Description: GIIM Note: maturase Location: 1192-1405 bp Feature: domain Description: GIIM Note: maturase Location: 1192-1405 bp Feature: gene Location: 1516-1743 bp Feature: gene Location: 2307-3257 bp Feature: domain Description: COG3177 Location: 2316-3249 bp Feature: domain Description: COG3 177 Location: 23 16-3 249 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388), COG3177 (Fic family protein )