myRT

myRT report for GCA_900168685.1_PRJEB19810

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Seq: FVZN01000014.1 (2348011 bp)
Overview 1 RT 1: 214209-220091 bp 2 RT 2: 531198-536496 bp 3 RT 3: 1080131-1084863 bp 4 RT 4: 1398174-1401944 bp 5 RT 5: 1830146-1836192 bp Neighborhood of RT #1 [214209, 220150] SLH SLH Big_5 Big_5 Big_5 Big_5 RVT-GII GIIM SLH SLH SLH Neighborhood of RT #2 [531198, 536510] PRK10416 RVT-GII GIIM PurR PBP2_TRAP_SBP_like_3 Neighborhood of RT #3 [1080131, 1084928] RVT-GII GIIM M3_not_pepF HTH_ARSR Neighborhood of RT #4 [1398174, 1402078] Lipoprotein_Ltp Lipoprotein_Ltp RVT-GII GIIM KOG2624 PP2C_2 Neighborhood of RT #5 [1830146, 1836803] GntT AzgA RVT-GII GIIM SLT SH3_3 Feature: gene Location: 214209-217124 bp Feature: domain Description: SLH Location: 214299-214419 bp Feature: domain Description: SLH Location: 21 4299-21 441 9 bp Feature: domain Description: SLH Location: 214494-214626 bp Feature: domain Description: SLH Location: 21 4494-21 4626 bp Feature: domain Description: Big_5 Location: 215235-215517 bp Feature: domain Description: Big_5 Location: 21 5235-21 551 7 bp Feature: domain Description: Big_5 Location: 215526-215829 bp Feature: domain Description: Big_5 Location: 21 5526-21 5829 bp Feature: domain Description: Big_5 Location: 215892-216135 bp Feature: domain Description: Big_5 Location: 21 5892-21 61 35 bp Feature: domain Description: Big_5 Location: 216822-217092 bp Feature: domain Description: Big_5 Location: 21 6822-21 7092 bp Feature: gene Location: 217233-217466 bp Feature: gene Location: 217717-218982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 217918-218536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 791 8-21 8536 bp Feature: domain Description: GIIM Note: maturase Location: 218590-218797 bp Feature: domain Description: GIIM Note: maturase Location: 21 8590-21 8797 bp Feature: gene Location: 219064-219261 bp Feature: gene Location: 219494-220150 bp Feature: domain Description: SLH Location: 219593-219722 bp Feature: domain Description: SLH Location: 21 9593-21 9722 bp Feature: domain Description: SLH Location: 219779-219902 bp Feature: domain Description: SLH Location: 21 9779-21 9902 bp Feature: domain Description: SLH Location: 219956-220091 bp Feature: domain Description: SLH Location: 21 9956-220091 bp Feature: gene Location: 531198-532265 bp Feature: domain Description: PRK10416 Location: 531228-532230 bp Feature: domain Description: PRK1 041 6 Location: 531 228-532230 bp Feature: gene Location: 532397-532630 bp Feature: gene Location: 532881-534146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 533082-533700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 533082-533700 bp Feature: domain Description: GIIM Note: maturase Location: 533754-533961 bp Feature: domain Description: GIIM Note: maturase Location: 533754-533961 bp Feature: gene Location: 534353-535339 bp Feature: domain Description: PurR Location: 534365-535286 bp Feature: domain Description: PurR Location: 534365-535286 bp Feature: gene Location: 535527-536510 bp Feature: domain Description: PBP2_TRAP_SBP_like_3 Location: 535617-536496 bp Feature: domain Description: PBP2_TRAP_SBP_like_3 Location: 53561 7-536496 bp Feature: gene Location: 1080131-1080757 bp Feature: gene Location: 1080886-1081119 bp Feature: gene Location: 1081370-1082635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1081571-1082189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 081 571 -1 0821 89 bp Feature: domain Description: GIIM Note: maturase Location: 1082243-1082450 bp Feature: domain Description: GIIM Note: maturase Location: 1 082243-1 082450 bp Feature: gene Location: 1082725-1084425 bp Feature: domain Description: M3_not_pepF Location: 1082785-1084417 bp Feature: domain Description: M3_not_pepF Location: 1 082785-1 08441 7 bp Feature: gene Location: 1084614-1084928 bp Feature: domain Description: HTH_ARSR Location: 1084644-1084863 bp Feature: domain Description: HTH_ARSR Location: 1 084644-1 084863 bp Feature: gene Location: 1398174-1398683 bp Feature: domain Description: Lipoprotein_Ltp Location: 1398390-1398528 bp Feature: domain Description: Lipoprotein_Ltp Location: 1 398390-1 398528 bp Feature: domain Description: Lipoprotein_Ltp Location: 1398537-1398678 bp Feature: domain Description: Lipoprotein_Ltp Location: 1 398537-1 398678 bp Feature: gene Location: 1398788-1399021 bp Feature: gene Location: 1399272-1400537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1399473-1400091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 399473-1 400091 bp Feature: domain Description: GIIM Note: maturase Location: 1400145-1400352 bp Feature: domain Description: GIIM Note: maturase Location: 1 4001 45-1 400352 bp Feature: gene Location: 1400612-1401256 bp Feature: domain Description: KOG2624 Location: 1400816-1400978 bp Feature: domain Description: KOG2624 Location: 1 40081 6-1 400978 bp Feature: gene Location: 1401278-1402078 bp Feature: domain Description: PP2C_2 Location: 1401386-1401944 bp Feature: domain Description: PP2C_2 Location: 1 401 386-1 401 944 bp Feature: gene Location: 1830146-1831573 bp Feature: domain Description: GntT Location: 1830158-1831556 bp Feature: domain Description: GntT Location: 1 8301 58-1 831 556 bp Feature: gene Location: 1831821-1833197 bp Feature: domain Description: AzgA Location: 1831893-1833186 bp Feature: domain Description: AzgA Location: 1 831 893-1 8331 86 bp Feature: gene Location: 1833407-1834672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1833608-1834226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 833608-1 834226 bp Feature: domain Description: GIIM Note: maturase Location: 1834280-1834487 bp Feature: domain Description: GIIM Note: maturase Location: 1 834280-1 834487 bp Feature: gene Location: 1834923-1835156 bp Feature: gene Location: 1835265-1836803 bp Feature: domain Description: SLT Location: 1835436-1835775 bp Feature: domain Description: SLT Location: 1 835436-1 835775 bp Feature: domain Description: SH3_3 Location: 1836015-1836192 bp Feature: domain Description: SH3_3 Location: 1 83601 5-1 8361 92 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FVZN01000011.1 (188893 bp)
Overview 1 RT 1: 76745-81677 bp Neighborhood of RT #1 [76745, 82153] PRK05469 EmrE RVT-GII GIIM sigpep_I_bact Feature: gene Location: 76745-77968 bp Feature: domain Description: PRK05469 Location: 76754-77963 bp Feature: domain Description: PRK05469 Location: 76754-77963 bp Feature: gene Location: 78198-79169 bp Feature: domain Description: EmrE Location: 78312-79107 bp Feature: domain Description: EmrE Location: 78312 -79107 bp Feature: gene Location: 79225-80490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79426-80044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7942 6-80044 bp Feature: domain Description: GIIM Note: maturase Location: 80098-80305 bp Feature: domain Description: GIIM Note: maturase Location: 80098-80305 bp Feature: gene Location: 80741-80974 bp Feature: gene Location: 81077-82153 bp Feature: domain Description: sigpep_I_bact Location: 81596-81677 bp Feature: domain Description: sigpep_I_bact Location: 81596-81677 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FVZN01000009.1 (177595 bp)
Overview 1 RT 1: 101314-109518 bp Neighborhood of RT #1 [101314, 109532] Inhibitor_I9 Peptidases_S8_subtilisin_Vpr-like BID_2 BID_2 MFS_OFA_like RVT-GII GIIM DUF4230 Feature: gene Location: 101314-105183 bp Feature: domain Description: Inhibitor_I9 Location: 101560-101842 bp Feature: domain Description: Inhibitor_I9 Location: 101560-101842 bp Feature: domain Description: Peptidases_S8_subtilisin_Vpr-like Location: 101980-103339 bp Feature: domain Description: Peptidases_S8_subtilisin_Vpr-like Location: 101980-103 3 3 9 bp Feature: domain Description: BID_2 Location: 104407-104653 bp Feature: domain Description: BID_2 Location: 104407-104653 bp Feature: domain Description: BID_2 Location: 104686-104914 bp Feature: domain Description: BID_2 Location: 104686-104914 bp Feature: gene Location: 105300-106583 bp Feature: domain Description: MFS_OFA_like Location: 105339-106515 bp Feature: domain Description: MFS_OFA_like Location: 1053 3 9-106515 bp Feature: gene Location: 106890-108152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107088-107706 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107088-107706 bp Feature: domain Description: GIIM Note: maturase Location: 107760-107967 bp Feature: domain Description: GIIM Note: maturase Location: 107760-107967 bp Feature: gene Location: 108262-108447 bp Feature: gene Location: 108789-109532 bp Feature: domain Description: DUF4230 Location: 109053-109518 bp Feature: domain Description: DUF423 0 Location: 109053 -109518 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FVZN01000013.1 (420155 bp)
Overview 1 RT 1: 204976-208656 bp Neighborhood of RT #1 [204976, 208656] RVT-GII GIIM Feature: gene Location: 204976-205224 bp Feature: gene Location: 205246-205455 bp Feature: gene Location: 205924-207189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 206125-206743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 206125-20674 3 bp Feature: domain Description: GIIM Note: maturase Location: 206794-207004 bp Feature: domain Description: GIIM Note: maturase Location: 206794 -207004 bp Feature: gene Location: 207870-208172 bp Feature: gene Location: 208294-208656 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FVZN01000012.1 (347343 bp)
Overview 1 RT 1: 163292-172848 bp 2 RT 2: 198016-204419 bp 3 RT 3: 328605-336427 bp 4 RT 4: 339691-347330 bp Neighborhood of RT #1 [163292, 172848] RVT-GII Ssb beta_clamp RVT-GII GIIM Neighborhood of RT #2 [198016, 204592] DEXHc_Snf KOG0387 RVT-GII TraC-F-type TraC-F-type Neighborhood of RT #3 [328605, 336483] MerR MerB RVT-GII HNHc PinE COG4644 DDE_Tnp_Tn3 Neighborhood of RT #4 [339691, 347341] PLA2_plant DEDD_Tnp_IS110 COG3547 RVT-GII HNHc P-type_ATPase_Cd-like Feature: gene Location: 163292-163546 bp Feature: gene Location: 163613-164776 bp Feature: gene Location: 165515-167386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165827-166535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165 827-1665 35 bp Feature: gene Location: 167619-167819 bp Feature: gene Location: 167867-168340 bp Feature: domain Description: Ssb Location: 167870-168299 bp Feature: domain Description: Ssb Location: 167870-168299 bp Feature: gene Location: 168448-169566 bp Feature: domain Description: beta_clamp Location: 168526-169552 bp Feature: domain Description: beta_clamp Location: 1685 26-1695 5 2 bp Feature: gene Location: 169709-169969 bp Feature: gene Location: 170568-171806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 170733-171348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 170733-171348 bp Feature: domain Description: GIIM Note: maturase Location: 171408-171615 bp Feature: domain Description: GIIM Note: maturase Location: 171408-171615 bp Feature: gene Location: 171908-172183 bp Feature: gene Location: 172180-172848 bp Feature: gene Location: 198016-199719 bp Feature: domain Description: DEXHc_Snf Location: 198442-199006 bp Feature: domain Description: DEXHc_Snf Location: 198442-199006 bp Feature: domain Description: KOG0387 Location: 199426-199699 bp Feature: domain Description: KOG0387 Location: 199426-199699 bp Feature: gene Location: 199785-199949 bp Feature: gene Location: 200486-201655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 200804-201509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 200804-2015 09 bp Feature: gene Location: 201762-202550 bp Feature: gene Location: 202580-204592 bp Feature: domain Description: TraC-F-type Location: 202976-203696 bp Feature: domain Description: TraC-F-type Location: 202976-203696 bp Feature: domain Description: TraC-F-type Location: 204125-204419 bp Feature: domain Description: TraC-F-type Location: 204125 -204419 bp Feature: gene Location: 328605-329033 bp Feature: domain Description: MerR Location: 328647-329022 bp Feature: domain Description: MerR Location: 328647-329022 bp Feature: gene Location: 329081-329809 bp Feature: domain Description: MerB Location: 329366-329780 bp Feature: domain Description: MerB Location: 329366-329780 bp Feature: gene Location: 330152-331927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 330410-331109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 330410-331109 bp Feature: domain Description: HNHc Note: nucleases Location: 331664-331805 bp Feature: domain Description: HNHc Note: nucleases Location: 331664-331805 bp Feature: gene Location: 332960-333517 bp Feature: domain Description: PinE Location: 332963-333509 bp Feature: domain Description: PinE Location: 332963-3335 09 bp Feature: gene Location: 333532-336483 bp Feature: domain Description: COG4644 Location: 333559-334465 bp Feature: domain Description: COG4644 Location: 3335 5 9-334465 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 335269-336427 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 335 269-336427 bp Feature: gene Location: 339691-340419 bp Feature: domain Description: PLA2_plant Location: 340207-340357 bp Feature: domain Description: PLA2_plant Location: 340207-34035 7 bp Feature: gene Location: 340808-342127 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 340823-341297 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 340823-341297 bp Feature: domain Description: COG3547 Location: 341531-341921 bp Feature: domain Description: COG35 47 Location: 3415 31-341921 bp Feature: gene Location: 343191-344966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 343449-344148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 343449-344148 bp Feature: domain Description: HNHc Note: nucleases Location: 344724-344856 bp Feature: domain Description: HNHc Note: nucleases Location: 344724-34485 6 bp Feature: gene Location: 344969-345103 bp Feature: gene Location: 345383-347341 bp Feature: domain Description: P-type_ATPase_Cd-like Location: 345551-347330 bp Feature: domain Description: P-type_ATPase_Cd-like Location: 345 5 5 1-347330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT