myRT

myRT report for GCA_900170025.1_NSND_Contig

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Seq: FWEX01000005.1 (931833 bp)
Overview 1 RT 1: 519982-525245 bp 2 RT 2: 652778-657451 bp Neighborhood of RT #1 [519982, 525245] YhcG YhcG_C RMtype1_S_EcoAO83I-TRD1-CR1_like RMtype1_S_EcoAO83I-TRD1-CR1_like RVT-AbiP2 IS285 Neighborhood of RT #2 [652778, 657453] HTH_Tnp_1 HTH_21 RVT-GII GIIM PHA02517 GrpB Feature: gene Location: 519982-521130 bp Feature: domain Description: YhcG Location: 520141-520522 bp Feature: domain Description: YhcG Location: 5201 41 -520522 bp Feature: domain Description: YhcG_C Location: 520585-521050 bp Feature: domain Description: YhcG_C Location: 520585-521 050 bp Feature: gene Location: 521218-522384 bp Feature: domain Description: RMtype1_S_EcoAO83I-TRD1-CR1_like Location: 521245-521710 bp Feature: domain Description: RMtype1 _S_EcoAO83I-TRD1 -CR1 _like Location: 521 245-521 71 0 bp Feature: domain Description: RMtype1_S_EcoAO83I-TRD1-CR1_like Location: 521854-522322 bp Feature: domain Description: RMtype1 _S_EcoAO83I-TRD1 -CR1 _like Location: 521 854-522322 bp Feature: gene Location: 522381-523199 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 522837-523167 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 522837-5231 67 bp Feature: gene Location: 523220-524470 bp Feature: domain Description: IS285 Location: 523328-524456 bp Feature: domain Description: IS285 Location: 523328-524456 bp Feature: gene Location: 524577-525245 bp Feature: gene Location: 652778-653128 bp Feature: domain Description: HTH_Tnp_1 Location: 652799-653015 bp Feature: domain Description: HTH_Tnp_1 Location: 652799-65301 5 bp Feature: gene Location: 653128-653547 bp Feature: domain Description: HTH_21 Location: 653242-653401 bp Feature: domain Description: HTH_21 Location: 653242-653401 bp Feature: gene Location: 654173-655705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 654446-655184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 654446-6551 84 bp Feature: domain Description: GIIM Note: maturase Location: 655280-655457 bp Feature: domain Description: GIIM Note: maturase Location: 655280-655457 bp Feature: gene Location: 655822-656289 bp Feature: domain Description: PHA02517 Location: 655825-656239 bp Feature: domain Description: PHA0251 7 Location: 655825-656239 bp Feature: gene Location: 657274-657453 bp Feature: domain Description: GrpB Location: 657325-657451 bp Feature: domain Description: GrpB Location: 657325-657451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhcG (COG4804), YhcG_C, RMtype1_S_EcoAO83I-TRD1-CR1_like (cd17267), RVT-AbiP2, IS285 (COG3328), HTH_Tnp_1 (pfam01527), HTH_21 (pfam13276), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)
GrpB (pfam04229)