myRT

myRT report for GCA_900172095.1_16404_3_33

Download annotations/find similar RTs

Seq: FWGL01000002.1 (1831742 bp)
Overview 1 RT 1: 1097993-1104675 bp 2 RT 2: 1557309-1564478 bp Neighborhood of RT #1 [1097993, 1104675] COG3440 RVT-Retrons HTH_XRE Neighborhood of RT #2 [1557309, 1564495] EAL RVT-UG4 FimD FimC Feature: gene Location: 1097993-1099051 bp Feature: domain Description: COG3440 Location: 1098623-1099010 bp Feature: domain Description: COG3440 Location: 1 098623-1 09901 0 bp Feature: gene Location: 1099250-1103101 bp Feature: gene Location: 1103142-1104059 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1103238-1103805 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 03238-1 1 03805 bp Feature: gene Location: 1104094-1104384 bp Feature: domain Description: HTH_XRE Location: 1104106-1104271 bp Feature: domain Description: HTH_XRE Location: 1 1 041 06-1 1 04271 bp Feature: gene Location: 1104436-1104675 bp Feature: gene Location: 1557309-1557515 bp Feature: gene Location: 1557605-1558459 bp Feature: domain Description: EAL Location: 1558289-1558442 bp Feature: domain Description: EAL Location: 1 558289-1 558442 bp Feature: gene Location: 1559096-1561126 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1559504-1559948 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 559504-1 559948 bp Feature: gene Location: 1561126-1563735 bp Feature: domain Description: FimD Location: 1561183-1563724 bp Feature: domain Description: FimD Location: 1 561 1 83-1 563724 bp Feature: gene Location: 1563767-1564495 bp Feature: domain Description: FimC Location: 1563815-1564478 bp Feature: domain Description: FimC Location: 1 56381 5-1 564478 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3440 (Predicted restriction endonuclease ), RVT-Retrons, HTH_XRE (smart00530), EAL (smart00052), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: FWGL01000008.1 (99160 bp)
Overview 1 RT 1: 379-4132 bp Neighborhood of RT #1 [379, 4132] SapB RVT-GII GIIM IS5 Feature: gene Location: 379-867 bp Feature: domain Description: SapB Location: 442-856 bp Feature: domain Description: SapB Location: 442 -856 bp Feature: gene Location: 1335-1499 bp Feature: gene Location: 1621-2910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1903-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1903-2 52 1 bp Feature: domain Description: GIIM Note: maturase Location: 2569-2773 bp Feature: domain Description: GIIM Note: maturase Location: 2 569-2 773 bp Feature: gene Location: 2949-3929 bp Feature: domain Description: IS5 Location: 3138-3915 bp Feature: domain Description: IS5 Location: 3138-3915 bp Feature: gene Location: 3983-4132 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SapB (smart00741), RVT-GII, GIIM (pfam08388), IS5 (COG3039)

Seq: FWGL01000024.1 (10493 bp)
Overview 1 RT 1: 729-4381 bp Neighborhood of RT #1 [729, 4395] RVT-GII PRK10276 Feature: gene Location: 729-1214 bp Feature: gene Location: 1593-1823 bp Feature: gene Location: 2057-3568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2462-3176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2462-3 176 bp Feature: gene Location: 3619-3852 bp Feature: gene Location: 3970-4395 bp Feature: domain Description: PRK10276 Location: 3973-4381 bp Feature: domain Description: PRK10276 Location: 3 973 -43 81 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)