myRT

myRT report for GCA_900172715.1_18090_4_65

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Seq: FWIU01000016.1 (99066 bp)
Overview 1 RT 1: 92352-99046 bp Neighborhood of RT #1 [92352, 99063] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 92352-93017 bp Feature: domain Description: INT_P4_C Location: 92457-93015 bp Feature: domain Description: INT_P4_C Location: 92457-9301 5 bp Feature: gene Location: 93278-93718 bp Feature: domain Description: Integrase_1 Location: 93284-93500 bp Feature: domain Description: Integrase_1 Location: 93284-93500 bp Feature: gene Location: 93775-95853 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 94183-94627 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 941 83-94627 bp Feature: gene Location: 95853-98462 bp Feature: domain Description: FimD Location: 95910-98451 bp Feature: domain Description: FimD Location: 9591 0-98451 bp Feature: gene Location: 98494-99063 bp Feature: domain Description: FimC Location: 98605-99046 bp Feature: domain Description: FimC Location: 98605-99046 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: FWIU01000037.1 (34425 bp)
Overview 1 RT 1: 17482-21564 bp Neighborhood of RT #1 [17482, 21701] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 17482-17913 bp Feature: domain Description: PRK10276 Location: 17533-17896 bp Feature: domain Description: PRK102 76 Location: 17533-17896 bp Feature: gene Location: 18036-18269 bp Feature: gene Location: 18320-19807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18725-19415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1872 5-19415 bp Feature: gene Location: 20056-21027 bp Feature: domain Description: StbA Location: 20059-21004 bp Feature: domain Description: StbA Location: 2 0059-2 1004 bp Feature: gene Location: 21030-21701 bp Feature: domain Description: Plasmid_stab_B Location: 21045-21252 bp Feature: domain Description: Plasmid_stab_B Location: 2 1045-2 12 52 bp Feature: domain Description: Plasmid_stab_B Location: 21357-21564 bp Feature: domain Description: Plasmid_stab_B Location: 2 1357-2 1564 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: FWIU01000001.1 (616946 bp)
Overview 1 RT 1: 131296-134528 bp Neighborhood of RT #1 [131296, 134725] DNA_pol3_theta RVT-GII PRK10276 Feature: gene Location: 131296-131553 bp Feature: domain Description: DNA_pol3_theta Location: 131305-131506 bp Feature: domain Description: DNA_pol3 _theta Location: 13 13 05-13 1506 bp Feature: gene Location: 131660-131887 bp Feature: gene Location: 132606-134093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 133011-133701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 3 011-13 3 701 bp Feature: gene Location: 134181-134360 bp Feature: gene Location: 134408-134725 bp Feature: domain Description: PRK10276 Location: 134414-134528 bp Feature: domain Description: PRK10276 Location: 13 4414-13 4528 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DNA_pol3_theta (pfam06440), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: FWIU01000067.1 (4679 bp)
Overview 1 RT 1: 2-1388 bp Neighborhood of RT #1 [2, 1388] RVT-GII Feature: gene Location: 2-787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 407-788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 07-788 bp Feature: gene Location: 842-1036 bp Feature: gene Location: 1233-1388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FWIU01000043.1 (21283 bp)
Overview 1 RT 1: 17665-21213 bp Neighborhood of RT #1 [17665, 21215] SapB RVT-GII GIIM IS5 Feature: gene Location: 17665-18153 bp Feature: domain Description: SapB Location: 17728-18142 bp Feature: domain Description: SapB Location: 17728-18142 bp Feature: gene Location: 18567-18785 bp Feature: gene Location: 18907-20196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19189-19807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19189-19807 bp Feature: domain Description: GIIM Note: maturase Location: 19855-20059 bp Feature: domain Description: GIIM Note: maturase Location: 1985 5 -2005 9 bp Feature: gene Location: 20340-21215 bp Feature: domain Description: IS5 Location: 20529-21213 bp Feature: domain Description: IS5 Location: 205 29-21213 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SapB (smart00741), RVT-GII, GIIM (pfam08388), IS5 (COG3039)