myRT

myRT report for GCA_900173595.1_20925_2_106

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Seq: FWMF01000009.1 (185408 bp)
Overview 1 RT 1: 151487-157067 bp Neighborhood of RT #1 [151487, 157067] PRK10396 DapA RVT-Retrons TIR_2 Feature: gene Location: 151487-152155 bp Feature: domain Description: PRK10396 Location: 151490-152147 bp Feature: domain Description: PRK1 0396 Location: 1 51 490-1 521 47 bp Feature: gene Location: 152254-153324 bp Feature: domain Description: DapA Location: 152443-153310 bp Feature: domain Description: DapA Location: 1 52443-1 5331 0 bp Feature: gene Location: 154484-155644 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 154487-154922 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 54487-1 54922 bp Feature: domain Description: TIR_2 Location: 155249-155528 bp Feature: domain Description: TIR_2 Location: 1 55249-1 55528 bp Feature: gene Location: 156558-156812 bp Feature: gene Location: 156828-157067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10396 (hypothetical protein; Provisional), DapA (COG0329), RVT-Retrons, TIR_2 (pfam13676)

Seq: FWMF01000002.1 (790364 bp)
Overview 1 RT 1: 541129-547982 bp Neighborhood of RT #1 [541129, 547999] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 541129-541794 bp Feature: domain Description: INT_P4_C Location: 541234-541792 bp Feature: domain Description: INT_P4_C Location: 5412 34-541792 bp Feature: gene Location: 542055-542495 bp Feature: domain Description: Integrase_1 Location: 542061-542277 bp Feature: domain Description: Integrase_1 Location: 542 061-542 2 77 bp Feature: gene Location: 542552-544630 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 542960-543404 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 542 960-543404 bp Feature: gene Location: 544630-547239 bp Feature: domain Description: FimD Location: 544687-547228 bp Feature: domain Description: FimD Location: 544687-5472 2 8 bp Feature: gene Location: 547271-547999 bp Feature: domain Description: FimC Location: 547304-547982 bp Feature: domain Description: FimC Location: 547304-547982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)