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myRT report for GCA_900176115.1_IMG-taxon_2503982046_annotated_assembly
Download annotations/find similar RTs
Seq:
FWWR01000011.1 (306226 bp)
Overview
1
RT 1: 163610-167217 bp
2
RT 2: 176142-182339 bp
3
RT 3: 187424-192204 bp
Neighborhood of RT #1 [163610, 167217]
SSB_OBF
Maff2
RVT-GII
HNHc
Maff2
Neighborhood of RT #2 [176142, 182515]
SR_TndX_transposase
Recombinase
Zn_ribbon_recom
DUF4368
RVT_N
RVT-GII
RVT-GII
GIIM
DUF5082
tRNA_anti-codon
Neighborhood of RT #3 [187424, 192224]
LolD
Relaxase
RVT-GII
Intron_maturas2
Relaxase
Feature: gene
Location: 163610-163924 bp
Feature: domain
Description: SSB_OBF
Location: 163634-163853 bp
Feature: domain
Description: SSB_OBF
Location: 1 63634-1 63853 bp
Feature: gene
Location: 163926-164057 bp
Feature: domain
Description: Maff2
Location: 163929-164055 bp
Feature: domain
Description: Maff2
Location: 1 63929-1 64055 bp
Feature: gene
Location: 164779-166638 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 165100-165835 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 1 651 00-1 65835 bp
Feature: domain
Description: HNHc
Note: nucleases
Location: 166366-166528 bp
Feature: domain
Description: HNHc
Note: nucleases
Location: 1 66366-1 66528 bp
Feature: gene
Location: 166743-166889 bp
Feature: domain
Description: Maff2
Location: 166794-166878 bp
Feature: domain
Description: Maff2
Location: 1 66794-1 66878 bp
Feature: gene
Location: 166900-167217 bp
Feature: gene
Location: 176142-176303 bp
Feature: gene
Location: 176382-178001 bp
Feature: domain
Description: SR_TndX_transposase
Location: 176412-176826 bp
Feature: domain
Description: SR_TndX_transposase
Location: 1 7641 2-1 76826 bp
Feature: domain
Description: Recombinase
Location: 176934-177294 bp
Feature: domain
Description: Recombinase
Location: 1 76934-1 77294 bp
Feature: domain
Description: Zn_ribbon_recom
Location: 177333-177525 bp
Feature: domain
Description: Zn_ribbon_recom
Location: 1 77333-1 77525 bp
Feature: domain
Description: DUF4368
Location: 177804-177999 bp
Feature: domain
Description: DUF4368
Location: 1 77804-1 77999 bp
Feature: gene
Location: 178703-179125 bp
Feature: domain
Description: RVT_N
Location: 178748-178991 bp
Feature: domain
Description: RVT_N
Location: 1 78748-1 78991 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 179036-179108 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 1 79036-1 791 08 bp
Feature: gene
Location: 179289-180110 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 179295-179664 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 1 79295-1 79664 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 179718-179949 bp
Feature: domain
Description: GIIM
Note: maturase
Location: 1 7971 8-1 79949 bp
Feature: gene
Location: 180487-181815 bp
Feature: domain
Description: DUF5082
Location: 180970-181120 bp
Feature: domain
Description: DUF5082
Location: 1 80970-1 81 1 20 bp
Feature: gene
Location: 181859-182515 bp
Feature: domain
Description: tRNA_anti-codon
Location: 182243-182339 bp
Feature: domain
Description: tRNA_anti-codon
Location: 1 82243-1 82339 bp
Feature: gene
Location: 187424-188116 bp
Feature: domain
Description: LolD
Location: 187436-188102 bp
Feature: domain
Description: LolD
Location: 1 87436-1 881 02 bp
Feature: gene
Location: 188417-189511 bp
Feature: domain
Description: Relaxase
Location: 188519-188921 bp
Feature: domain
Description: Relaxase
Location: 1 8851 9-1 88921 bp
Feature: gene
Location: 189512-191389 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 189836-190658 bp
Feature: RT
Description: RVT-GII
Note: GII (Group II introns RT)
Location: 1 89836-1 90658 bp
Feature: domain
Description: Intron_maturas2
Location: 190763-191039 bp
Feature: domain
Description: Intron_maturas2
Location: 1 90763-1 91 039 bp
Feature: gene
Location: 191439-191684 bp
Feature: gene
Location: 191853-192224 bp
Feature: domain
Description: Relaxase
Location: 191883-192204 bp
Feature: domain
Description: Relaxase
Location: 1 91 883-1 92204 bp
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