myRT

myRT report for GCA_900176845.1_Bcereus.16-00185

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Seq: FWZD01000058.1 (443430 bp)
Overview 1 RT 1: 62836-72532 bp Neighborhood of RT #1 [62836, 72532] dnd_assoc_2 DUF87 HATPase_c_3 RVT-UG2 DUF4870 Feature: gene Location: 62836-67935 bp Feature: domain Description: dnd_assoc_2 Location: 62857-66694 bp Feature: domain Description: dnd_assoc_2 Location: 62857-66694 bp Feature: domain Description: DUF87 Location: 66880-67498 bp Feature: domain Description: DUF87 Location: 66880-67498 bp Feature: gene Location: 68279-69805 bp Feature: domain Description: HATPase_c_3 Location: 68372-68678 bp Feature: domain Description: HATPase_c_3 Location: 68372-68678 bp Feature: gene Location: 70173-71582 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 70449-71286 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 70449-71 286 bp Feature: gene Location: 71939-72277 bp Feature: domain Description: DUF4870 Location: 71981-72242 bp Feature: domain Description: DUF4870 Location: 71 981 -72242 bp Feature: gene Location: 72278-72532 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnd_assoc_2 (TIGR03237), DUF87 (pfam01935), HATPase_c_3 (pfam13589), RVT-UG2, DUF4870 (pfam09685)

Seq: FWZD01000017.1 (2550 bp)
Overview 1 RT 1: 106-1897 bp Neighborhood of RT #1 [106, 1923] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 106-1923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 370-1201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 370-12 01 bp Feature: domain Description: Intron_maturas2 Location: 1282-1573 bp Feature: domain Description: Intron_maturas2 Location: 12 82 -1573 bp Feature: domain Description: HNHc Note: nucleases Location: 1720-1897 bp Feature: domain Description: HNHc Note: nucleases Location: 172 0-1897 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: FWZD01000068.1 (317588 bp)
Overview 1 RT 1: 2530-14889 bp Neighborhood of RT #1 [2530, 14889] CcdC B_ant_repeat B_ant_repeat B_ant_repeat RVT-GII HNHc B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat Feature: gene Location: 2530-3036 bp Feature: domain Description: CcdC Location: 2539-3001 bp Feature: domain Description: CcdC Location: 253 9-3 001 bp Feature: gene Location: 3099-4379 bp Feature: domain Description: B_ant_repeat Location: 3177-3288 bp Feature: domain Description: B_ant_repeat Location: 3 177-3 288 bp Feature: domain Description: B_ant_repeat Location: 3528-3684 bp Feature: domain Description: B_ant_repeat Location: 3 528-3 684 bp Feature: domain Description: B_ant_repeat Location: 3927-4083 bp Feature: domain Description: B_ant_repeat Location: 3 927-4083 bp Feature: gene Location: 5081-7009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5402-6137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5402-613 7 bp Feature: domain Description: HNHc Note: nucleases Location: 6728-6893 bp Feature: domain Description: HNHc Note: nucleases Location: 6728-6893 bp Feature: gene Location: 7178-13543 bp Feature: domain Description: B_ant_repeat Location: 7187-7322 bp Feature: domain Description: B_ant_repeat Location: 7187-73 22 bp Feature: domain Description: B_ant_repeat Location: 7562-7715 bp Feature: domain Description: B_ant_repeat Location: 7562-7715 bp Feature: domain Description: B_ant_repeat Location: 7952-8105 bp Feature: domain Description: B_ant_repeat Location: 7952-8105 bp Feature: domain Description: B_ant_repeat Location: 8345-8498 bp Feature: domain Description: B_ant_repeat Location: 83 45-8498 bp Feature: domain Description: B_ant_repeat Location: 8741-8894 bp Feature: domain Description: B_ant_repeat Location: 8741-8894 bp Feature: domain Description: B_ant_repeat Location: 9137-9293 bp Feature: domain Description: B_ant_repeat Location: 913 7-9293 bp Feature: domain Description: B_ant_repeat Location: 9533-9689 bp Feature: domain Description: B_ant_repeat Location: 953 3 -9689 bp Feature: domain Description: B_ant_repeat Location: 9929-10082 bp Feature: domain Description: B_ant_repeat Location: 9929-10082 bp Feature: domain Description: B_ant_repeat Location: 10325-10481 bp Feature: domain Description: B_ant_repeat Location: 103 25-10481 bp Feature: domain Description: B_ant_repeat Location: 10721-10877 bp Feature: domain Description: B_ant_repeat Location: 10721-10877 bp Feature: domain Description: B_ant_repeat Location: 11117-11273 bp Feature: domain Description: B_ant_repeat Location: 11117-11273 bp Feature: domain Description: B_ant_repeat Location: 11513-11669 bp Feature: domain Description: B_ant_repeat Location: 11513 -11669 bp Feature: domain Description: B_ant_repeat Location: 11909-12065 bp Feature: domain Description: B_ant_repeat Location: 11909-12065 bp Feature: domain Description: B_ant_repeat Location: 12305-12458 bp Feature: domain Description: B_ant_repeat Location: 123 05-12458 bp Feature: domain Description: B_ant_repeat Location: 12701-12857 bp Feature: domain Description: B_ant_repeat Location: 12701-12857 bp Feature: domain Description: B_ant_repeat Location: 13097-13250 bp Feature: domain Description: B_ant_repeat Location: 13 097-13 250 bp Feature: gene Location: 13816-14889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CcdC (COG4846), B_ant_repeat (TIGR01451), RVT-GII, HNHc (smart00507)

Seq: FWZD01000016.1 (2473 bp)
Overview 1 RT 1: 560-2342 bp Neighborhood of RT #1 [560, 2371] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 560-2371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 824-1655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 824 -1655 bp Feature: domain Description: Intron_maturas2 Location: 1733-2072 bp Feature: domain Description: Intron_maturas2 Location: 1733-2072 bp Feature: domain Description: HNHc Note: nucleases Location: 2165-2342 bp Feature: domain Description: HNHc Note: nucleases Location: 2165-234 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: FWZD01000021.1 (2371 bp)
Overview 1 RT 1: 615-1908 bp Neighborhood of RT #1 [615, 2261] RVT_N RVT-GII GIIM Feature: gene Location: 615-2261 bp Feature: domain Description: RVT_N Location: 657-894 bp Feature: domain Description: RVT_N Location: 65 7-894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 948-1608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 948-1608 bp Feature: domain Description: GIIM Note: maturase Location: 1677-1908 bp Feature: domain Description: GIIM Note: maturase Location: 1677-1908 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: FWZD01000033.1 (115873 bp)
Overview 1 RT 1: 62098-67866 bp 2 RT 2: 99834-105520 bp Neighborhood of RT #1 [62098, 67866] KOG4768 RVT-GII DEXHc_Snf DEXHc_Snf Neighborhood of RT #2 [99834, 105537] AAA_10 RVT-GII HNHc AAA_10 Feature: gene Location: 62098-62358 bp Feature: gene Location: 62559-63221 bp Feature: domain Description: KOG4768 Location: 62580-63210 bp Feature: domain Description: KOG476 8 Location: 6 2580-6 3210 bp Feature: gene Location: 63298-64398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63571-64357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 3571-6 4357 bp Feature: gene Location: 64954-66768 bp Feature: domain Description: DEXHc_Snf Location: 65797-66181 bp Feature: domain Description: DEXHc_Snf Location: 6 5797-6 6 181 bp Feature: domain Description: DEXHc_Snf Location: 66619-66742 bp Feature: domain Description: DEXHc_Snf Location: 6 6 6 19-6 6 742 bp Feature: gene Location: 67561-67866 bp Feature: gene Location: 99834-100316 bp Feature: gene Location: 100318-101196 bp Feature: domain Description: AAA_10 Location: 100324-101080 bp Feature: domain Description: AAA_10 Location: 100324-101080 bp Feature: gene Location: 101454-103286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101754-102459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101754-102459 bp Feature: domain Description: HNHc Note: nucleases Location: 103038-103170 bp Feature: domain Description: HNHc Note: nucleases Location: 103038-103170 bp Feature: gene Location: 103679-103855 bp Feature: gene Location: 104002-105537 bp Feature: domain Description: AAA_10 Location: 105343-105520 bp Feature: domain Description: AAA_10 Location: 105343-105520 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT-GII, DEXHc_Snf (cd17919), AAA_10 (pfam12846), HNHc (smart00507)

Seq: FWZD01000026.1 (22258 bp)
Overview 1 RT 1: 10643-17291 bp Neighborhood of RT #1 [10643, 17291] HTH_XRE RVT-GII GIIM HNHc DUF3854 Feature: gene Location: 10643-10885 bp Feature: domain Description: HTH_XRE Location: 10712-10850 bp Feature: domain Description: HTH_XRE Location: 107 12-10850 bp Feature: gene Location: 10878-12437 bp Feature: gene Location: 13532-15319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13790-14489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 137 90-14489 bp Feature: domain Description: GIIM Note: maturase Location: 14573-14816 bp Feature: domain Description: GIIM Note: maturase Location: 1457 3-14816 bp Feature: domain Description: HNHc Note: nucleases Location: 15062-15200 bp Feature: domain Description: HNHc Note: nucleases Location: 15062-15200 bp Feature: gene Location: 15324-16595 bp Feature: domain Description: DUF3854 Location: 16242-16563 bp Feature: domain Description: DUF3854 Location: 16242-16563 bp Feature: gene Location: 17061-17291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF3854 (pfam12965)