myRT

myRT report for GCA_900176955.1_Bcereus.16-00184

Download annotations/find similar RTs

Seq: FWYT01000015.1 (2681 bp)
Overview 1 RT 1: 165-2450 bp Neighborhood of RT #1 [165, 2566] RVT-GII HNHc Feature: gene Location: 165-341 bp Feature: gene Location: 734-2566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1034-1739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 034-1 739 bp Feature: domain Description: HNHc Note: nucleases Location: 2318-2450 bp Feature: domain Description: HNHc Note: nucleases Location: 231 8-2450 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: FWYT01000052.1 (138928 bp)
Overview 1 RT 1: 5494-10303 bp 2 RT 2: 14826-24185 bp Neighborhood of RT #1 [5494, 10308] COG4712 RVT-GII beta_clamp Neighborhood of RT #2 [14826, 24715] E1_enzyme_family RVT-GII Intron_maturas2 HNHc PRTRC_ThiF NT_KNTase_like RVT-GII HEPN PRK06850 Feature: gene Location: 5494-5850 bp Feature: domain Description: COG4712 Location: 5503-5845 bp Feature: domain Description: COG4712 Location: 5503-5845 bp Feature: gene Location: 6274-6414 bp Feature: gene Location: 6609-8510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6927-7629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 692 7-762 9 bp Feature: gene Location: 8588-9115 bp Feature: gene Location: 9196-10308 bp Feature: domain Description: beta_clamp Location: 9199-10303 bp Feature: domain Description: beta_clamp Location: 9199-10303 bp Feature: gene Location: 14826-15227 bp Feature: gene Location: 15240-15422 bp Feature: domain Description: E1_enzyme_family Location: 15288-15408 bp Feature: domain Description: E1_enzyme_family Location: 152 88-15408 bp Feature: gene Location: 15991-17931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16321-17158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1632 1-17158 bp Feature: domain Description: Intron_maturas2 Location: 17296-17602 bp Feature: domain Description: Intron_maturas2 Location: 172 96-17602 bp Feature: domain Description: HNHc Note: nucleases Location: 17725-17878 bp Feature: domain Description: HNHc Note: nucleases Location: 1772 5-17878 bp Feature: gene Location: 18183-18725 bp Feature: domain Description: PRTRC_ThiF Location: 18246-18705 bp Feature: domain Description: PRTRC_ThiF Location: 182 46-18705 bp Feature: gene Location: 18745-19116 bp Feature: gene Location: 19138-19539 bp Feature: domain Description: NT_KNTase_like Location: 19213-19516 bp Feature: domain Description: NT_KNTase_like Location: 192 13-19516 bp Feature: gene Location: 20098-20301 bp Feature: gene Location: 20298-22229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20619-21354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0619-2 1354 bp Feature: gene Location: 22375-22818 bp Feature: domain Description: HEPN Location: 22429-22777 bp Feature: domain Description: HEPN Location: 2 2 42 9-2 2 777 bp Feature: gene Location: 22943-24715 bp Feature: domain Description: PRK06850 Location: 22958-24185 bp Feature: domain Description: PRK06850 Location: 2 2 958-2 4185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4712 (Uncharacterized protein ), RVT-GII, beta_clamp (cl29549), E1_enzyme_family (cl22428), Intron_maturas2 (pfam01348), HNHc (smart00507), PRTRC_ThiF (TIGR03736), NT_KNTase_like (cd05403), HEPN (smart00748), PRK06850 (hypothetical protein; Provisional)

Seq: FWYT01000024.1 (2370 bp)
Overview 1 RT 1: 110-2007 bp Neighborhood of RT #1 [110, 2007] RVT_N RVT-GII GIIM Feature: gene Location: 110-1756 bp Feature: domain Description: RVT_N Location: 152-389 bp Feature: domain Description: RVT_N Location: 152-3 89 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 443-1103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 443 -1103 bp Feature: domain Description: GIIM Note: maturase Location: 1172-1403 bp Feature: domain Description: GIIM Note: maturase Location: 1172-1403 bp Feature: gene Location: 1804-2007 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: FWYT01000148.1 (124073 bp)
Overview 1 RT 1: 108312-114107 bp Neighborhood of RT #1 [108312, 114109] PRK12451 RVT-GII Intron_maturas2 HNHc SAM_MT YphP_YqiW Feature: gene Location: 108312-110000 bp Feature: domain Description: PRK12451 Location: 108315-109998 bp Feature: domain Description: PRK124 51 Location: 108315-109998 bp Feature: gene Location: 110301-110468 bp Feature: gene Location: 110626-112443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110890-111721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110890-111721 bp Feature: domain Description: Intron_maturas2 Location: 111802-112093 bp Feature: domain Description: Intron_maturas2 Location: 111802-112093 bp Feature: domain Description: HNHc Note: nucleases Location: 112240-112417 bp Feature: domain Description: HNHc Note: nucleases Location: 11224 0-1124 17 bp Feature: gene Location: 113059-113625 bp Feature: domain Description: SAM_MT Location: 113182-113614 bp Feature: domain Description: SAM_MT Location: 113182-113614 bp Feature: gene Location: 113675-114109 bp Feature: domain Description: YphP_YqiW Location: 113699-114107 bp Feature: domain Description: YphP_YqiW Location: 113699-114 107 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12451 (arginyl-tRNA synthetase; Reviewed), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), SAM_MT (pfam04445), YphP_YqiW (TIGR04191)

Seq: FWYT01000056.1 (82840 bp)
Overview 1 RT 1: 11364-18478 bp 2 RT 2: 24470-33858 bp Neighborhood of RT #1 [11364, 18498] LPD1 RVT-GII HNHc DUF3854 T_den_put_tspse Neighborhood of RT #2 [24470, 33858] CwlT_like RVT-GII HNHc CwlT_like NlpD Spr Feature: gene Location: 11364-13139 bp Feature: domain Description: LPD1 Location: 12888-13083 bp Feature: domain Description: LPD1 Location: 12888-13083 bp Feature: gene Location: 13129-13659 bp Feature: gene Location: 14395-16278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14716-15454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14716-15 45 4 bp Feature: domain Description: HNHc Note: nucleases Location: 16012-16159 bp Feature: domain Description: HNHc Note: nucleases Location: 16012-1615 9 bp Feature: gene Location: 16362-17285 bp Feature: domain Description: DUF3854 Location: 16902-17253 bp Feature: domain Description: DUF385 4 Location: 16902-1725 3 bp Feature: gene Location: 17614-18498 bp Feature: domain Description: T_den_put_tspse Location: 17656-18478 bp Feature: domain Description: T_den_put_tspse Location: 1765 6-18478 bp Feature: gene Location: 24470-28450 bp Feature: gene Location: 28447-29445 bp Feature: domain Description: CwlT_like Location: 29299-29422 bp Feature: domain Description: CwlT_like Location: 29299-29422 bp Feature: gene Location: 30155-31924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30413-31109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30413-31109 bp Feature: domain Description: HNHc Note: nucleases Location: 31670-31808 bp Feature: domain Description: HNHc Note: nucleases Location: 31670-31808 bp Feature: gene Location: 32040-33266 bp Feature: domain Description: CwlT_like Location: 32082-32379 bp Feature: domain Description: CwlT_like Location: 32082-32379 bp Feature: domain Description: NlpD Location: 32409-32838 bp Feature: domain Description: NlpD Location: 32409-32838 bp Feature: domain Description: Spr Location: 32874-33207 bp Feature: domain Description: Spr Location: 32874-33207 bp Feature: gene Location: 33283-33858 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LPD1 (pfam18796), RVT-GII, HNHc (smart00507), DUF3854 (pfam12965), T_den_put_tspse (TIGR01784), CwlT_like, NlpD (COG0739), Spr (COG0791)

Seq: FWYT01000103.1 (19814 bp)
Overview 1 RT 1: 7793-17136 bp Neighborhood of RT #1 [7793, 17144] groES groEL RVT-UG8 RVT-UG3 guaA AzgA Feature: gene Location: 7793-8077 bp Feature: domain Description: groES Location: 7796-8072 bp Feature: domain Description: groES Location: 7796 -8072 bp Feature: gene Location: 8116-9750 bp Feature: domain Description: groEL Location: 8119-9736 bp Feature: domain Description: groEL Location: 8119-9736 bp Feature: gene Location: 9954-11867 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 10428-10893 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 10428-10893 bp Feature: gene Location: 12216-13370 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 12411-12864 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 12411-1286 4 bp Feature: gene Location: 13887-15434 bp Feature: domain Description: guaA Location: 13908-15432 bp Feature: domain Description: guaA Location: 13908-15432 bp Feature: gene Location: 15819-17144 bp Feature: domain Description: AzgA Location: 15822-17136 bp Feature: domain Description: AzgA Location: 15822-17136 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groES (PRK14533), groEL (PRK12852), RVT-UG8, RVT-UG3, guaA (PRK00074), AzgA (COG2252)