myRT

myRT report for GCA_900177385.1_IMG-taxon_2622736627_annotated_assembly

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Seq: FXBJ01000002.1 (2518606 bp)
Overview 1 RT 1: 126266-134786 bp 2 RT 2: 208167-212807 bp 3 RT 3: 390826-397929 bp 4 RT 4: 443046-447274 bp 5 RT 5: 490677-493924 bp 6 RT 6: 730166-734297 bp 7 RT 7: 1388013-1395086 bp Neighborhood of RT #1 [126266, 134786] thia_cytX thia_cytX RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 RVT-GII group_II_RT_mat Neighborhood of RT #2 [208167, 212860] AllD AllD RVT-GII GIIM HAD_HPP HP_PGM_like Neighborhood of RT #3 [390826, 397976] ZntA ZntA CopY_TcrY RVT-GII GIIM Peptidase_S66_mccF_like OYE_like_4_FMN Neighborhood of RT #4 [443046, 447274] organ_hyd_perox Nudix_Hydrolase_25 RVT-GII GIIM ECF_S_folT_fam Neighborhood of RT #5 [490677, 493924] DDE_Tnp_1 RVT-GII GIIM RVT-GII Neighborhood of RT #6 [730166, 734297] rplM rpsI RVT-GII GIIM Neighborhood of RT #7 [1388013, 1395094] IscR YhgE RVT-GII GIIM EamA EamA DedA Feature: gene Location: 126266-126511 bp Feature: domain Description: thia_cytX Location: 126278-126485 bp Feature: domain Description: thia_cytX Location: 1 26278-1 26485 bp Feature: gene Location: 126617-126808 bp Feature: domain Description: thia_cytX Location: 126623-126788 bp Feature: domain Description: thia_cytX Location: 1 26623-1 26788 bp Feature: gene Location: 127620-128903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127830-128451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 27830-1 28451 bp Feature: domain Description: GIIM Note: maturase Location: 128511-128733 bp Feature: domain Description: GIIM Note: maturase Location: 1 2851 1 -1 28733 bp Feature: gene Location: 129379-130947 bp Feature: domain Description: LZ_Tnp_IS66 Location: 129466-129712 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 29466-1 2971 2 bp Feature: domain Description: zf-IS66 Location: 129736-129871 bp Feature: domain Description: zf-IS66 Location: 1 29736-1 29871 bp Feature: domain Description: DDE_Tnp_IS66 Location: 129931-130774 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 29931 -1 30774 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 130795-130918 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 30795-1 3091 8 bp Feature: gene Location: 131055-131411 bp Feature: domain Description: TnpB_IS66 Location: 131085-131376 bp Feature: domain Description: TnpB_IS66 Location: 1 31 085-1 31 376 bp Feature: gene Location: 131413-131610 bp Feature: gene Location: 131844-131999 bp Feature: gene Location: 132192-132926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132201-132825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 32201 -1 32825 bp Feature: gene Location: 132966-133127 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 133005-133116 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 33005-1 331 1 6 bp Feature: gene Location: 133731-134786 bp Feature: gene Location: 208167-208304 bp Feature: domain Description: AllD Location: 208170-208299 bp Feature: domain Description: AllD Location: 2081 70-208299 bp Feature: gene Location: 208430-208942 bp Feature: domain Description: AllD Location: 208436-208898 bp Feature: domain Description: AllD Location: 208436-208898 bp Feature: gene Location: 209450-210733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 209660-210281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 209660-21 0281 bp Feature: domain Description: GIIM Note: maturase Location: 210341-210563 bp Feature: domain Description: GIIM Note: maturase Location: 21 0341 -21 0563 bp Feature: gene Location: 211376-212152 bp Feature: domain Description: HAD_HPP Location: 211397-212141 bp Feature: domain Description: HAD_HPP Location: 21 1 397-21 21 41 bp Feature: gene Location: 212186-212860 bp Feature: domain Description: HP_PGM_like Location: 212207-212807 bp Feature: domain Description: HP_PGM_like Location: 21 2207-21 2807 bp Feature: gene Location: 390826-393282 bp Feature: domain Description: ZntA Location: 390832-391036 bp Feature: domain Description: ZntA Location: 390832-391 036 bp Feature: domain Description: ZntA Location: 391045-393268 bp Feature: domain Description: ZntA Location: 391 045-393268 bp Feature: gene Location: 393307-393765 bp Feature: domain Description: CopY_TcrY Location: 393352-393736 bp Feature: domain Description: CopY_TcrY Location: 393352-393736 bp Feature: gene Location: 393926-395209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394136-394757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3941 36-394757 bp Feature: domain Description: GIIM Note: maturase Location: 394817-395039 bp Feature: domain Description: GIIM Note: maturase Location: 39481 7-395039 bp Feature: gene Location: 395742-396833 bp Feature: domain Description: Peptidase_S66_mccF_like Location: 395778-396768 bp Feature: domain Description: Peptidase_S66_mccF_like Location: 395778-396768 bp Feature: gene Location: 396852-397976 bp Feature: domain Description: OYE_like_4_FMN Location: 396876-397929 bp Feature: domain Description: OYE_like_4_FMN Location: 396876-397929 bp Feature: gene Location: 443046-443486 bp Feature: domain Description: organ_hyd_perox Location: 443067-443460 bp Feature: domain Description: organ_hyd_perox Location: 443067-443460 bp Feature: gene Location: 443543-444025 bp Feature: domain Description: Nudix_Hydrolase_25 Location: 443612-443978 bp Feature: domain Description: Nudix_Hydrolase_25 Location: 44361 2-443978 bp Feature: gene Location: 444191-445474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 444401-445022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 444401 -445022 bp Feature: domain Description: GIIM Note: maturase Location: 445082-445304 bp Feature: domain Description: GIIM Note: maturase Location: 445082-445304 bp Feature: gene Location: 446088-446606 bp Feature: domain Description: ECF_S_folT_fam Location: 446103-446580 bp Feature: domain Description: ECF_S_folT_fam Location: 4461 03-446580 bp Feature: gene Location: 447014-447274 bp Feature: gene Location: 490677-491078 bp Feature: domain Description: DDE_Tnp_1 Location: 490710-490908 bp Feature: domain Description: DDE_Tnp_1 Location: 49071 0-490908 bp Feature: gene Location: 491201-491482 bp Feature: gene Location: 491989-492657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 491992-492205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 491 992-492205 bp Feature: domain Description: GIIM Note: maturase Location: 492265-492487 bp Feature: domain Description: GIIM Note: maturase Location: 492265-492487 bp Feature: gene Location: 492691-493272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 492901-493270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 492901 -493270 bp Feature: gene Location: 493565-493723 bp Feature: gene Location: 493733-493924 bp Feature: gene Location: 730166-730609 bp Feature: domain Description: rplM Location: 730175-730598 bp Feature: domain Description: rplM Location: 7301 75-730598 bp Feature: gene Location: 730623-731015 bp Feature: domain Description: rpsI Location: 730626-731013 bp Feature: domain Description: rpsI Location: 730626-731 01 3 bp Feature: gene Location: 731566-732849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 731776-732397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 731 776-732397 bp Feature: domain Description: GIIM Note: maturase Location: 732457-732679 bp Feature: domain Description: GIIM Note: maturase Location: 732457-732679 bp Feature: gene Location: 733150-733470 bp Feature: gene Location: 733752-734297 bp Feature: gene Location: 1388013-1388498 bp Feature: domain Description: IscR Location: 1388025-1388475 bp Feature: domain Description: IscR Location: 1 388025-1 388475 bp Feature: gene Location: 1388525-1391362 bp Feature: domain Description: YhgE Location: 1388528-1391327 bp Feature: domain Description: YhgE Location: 1 388528-1 391 327 bp Feature: gene Location: 1391912-1393195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1392122-1392743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3921 22-1 392743 bp Feature: domain Description: GIIM Note: maturase Location: 1392803-1393025 bp Feature: domain Description: GIIM Note: maturase Location: 1 392803-1 393025 bp Feature: gene Location: 1393275-1394177 bp Feature: domain Description: EamA Location: 1393290-1393686 bp Feature: domain Description: EamA Location: 1 393290-1 393686 bp Feature: domain Description: EamA Location: 1393773-1394166 bp Feature: domain Description: EamA Location: 1 393773-1 3941 66 bp Feature: gene Location: 1394597-1395094 bp Feature: domain Description: DedA Location: 1394606-1395086 bp Feature: domain Description: DedA Location: 1 394606-1 395086 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT thia_cytX (TIGR02358), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717), group_II_RT_mat (TIGR04416), AllD (TIGR03175)
HAD_HPP (cd07517), HP_PGM_like (cd07067), ZntA (COG2217), CopY_TcrY (TIGR02698), Peptidase_S66_mccF_like (cd07062), OYE_like_4_FMN (cd04735), organ_hyd_perox (TIGR03561), Nudix_Hydrolase_25 (cd04684), ECF_S_folT_fam (TIGR04518), DDE_Tnp_1 (pfam01609)
rplM (PRK09216), rpsI (PRK00132), IscR (TIGR02010), YhgE (COG1511), EamA (pfam00892), DedA (COG0586)