myRT

myRT report for GCA_900179545.1_19789_6_31

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Seq: FXID01000055.1 (18263 bp)
Overview 1 RT 1: 10123-15210 bp Neighborhood of RT #1 [10123, 15707] COG5340 PRK07726 RVT-GII HNHc DUF3991 Toprim_2 Feature: gene Location: 10123-10716 bp Feature: domain Description: COG5340 Location: 10156-10672 bp Feature: domain Description: COG5340 Location: 1 01 56-1 0672 bp Feature: gene Location: 10790-11608 bp Feature: domain Description: PRK07726 Location: 10796-11582 bp Feature: domain Description: PRK07726 Location: 1 0796-1 1 582 bp Feature: gene Location: 11825-13636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12122-12824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 22-1 2824 bp Feature: domain Description: HNHc Note: nucleases Location: 13367-13493 bp Feature: domain Description: HNHc Note: nucleases Location: 1 3367-1 3493 bp Feature: gene Location: 13814-13963 bp Feature: gene Location: 14310-15707 bp Feature: domain Description: DUF3991 Location: 14688-14931 bp Feature: domain Description: DUF3991 Location: 1 4688-1 4931 bp Feature: domain Description: Toprim_2 Location: 15000-15210 bp Feature: domain Description: Toprim_2 Location: 1 5000-1 521 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FXID01000011.1 (61326 bp)
Overview 1 RT 1: 48576-54429 bp Neighborhood of RT #1 [48576, 54548] VirB4 RVT-GII HNHc Glucosaminidase Peptidase_M23 Feature: gene Location: 48576-50270 bp Feature: domain Description: VirB4 Location: 48894-49578 bp Feature: domain Description: VirB4 Location: 48894-49578 bp Feature: gene Location: 50538-50771 bp Feature: gene Location: 50958-52835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51273-52011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 512 73-52 011 bp Feature: domain Description: HNHc Note: nucleases Location: 52569-52722 bp Feature: domain Description: HNHc Note: nucleases Location: 52 569-52 72 2 bp Feature: gene Location: 53023-53343 bp Feature: gene Location: 53343-54548 bp Feature: domain Description: Glucosaminidase Location: 53619-54015 bp Feature: domain Description: Glucosaminidase Location: 53619-54015 bp Feature: domain Description: Peptidase_M23 Location: 54192-54429 bp Feature: domain Description: Peptidase_M2 3 Location: 54192 -5442 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FXID01000103.1 (4689 bp)
Overview 1 RT 1: 3-4510 bp Neighborhood of RT #1 [3, 4587] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 3-272 bp Feature: domain Description: ArdA Location: 21-240 bp Feature: domain Description: ArdA Location: 21-240 bp Feature: gene Location: 274-483 bp Feature: gene Location: 613-2523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 946-1684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 946-1684 bp Feature: domain Description: HNHc Note: nucleases Location: 2239-2404 bp Feature: domain Description: HNHc Note: nucleases Location: 223 9-2404 bp Feature: gene Location: 3403-4587 bp Feature: domain Description: HTH_XRE Location: 3433-3577 bp Feature: domain Description: HTH_XRE Location: 3 43 3 -3 577 bp Feature: domain Description: Rol_Rep_N Location: 3610-3874 bp Feature: domain Description: Rol_Rep_N Location: 3 610-3 874 bp Feature: domain Description: Rep_trans Location: 3898-4510 bp Feature: domain Description: Rep_trans Location: 3 898-4510 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT