myRT

myRT report for GCA_900179725.1_19789_6_93

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Seq: FXJC01000050.1 (19794 bp)
Overview 1 RT 1: 3022-8336 bp Neighborhood of RT #1 [3022, 8350] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 3022-3276 bp Feature: gene Location: 3532-4716 bp Feature: domain Description: HTH_XRE Location: 3562-3706 bp Feature: domain Description: HTH_XRE Location: 3562-3706 bp Feature: domain Description: Rol_Rep_N Location: 3739-4003 bp Feature: domain Description: Rol_Rep_N Location: 3739-4003 bp Feature: domain Description: Rep_trans Location: 4027-4639 bp Feature: domain Description: Rep_trans Location: 4027-4639 bp Feature: gene Location: 5596-7506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5929-6667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5929-6667 bp Feature: domain Description: HNHc Note: nucleases Location: 7222-7387 bp Feature: domain Description: HNHc Note: nucleases Location: 7222-7387 bp Feature: gene Location: 7694-7834 bp Feature: gene Location: 7847-8350 bp Feature: domain Description: ArdA Location: 7865-8336 bp Feature: domain Description: ArdA Location: 7865-8336 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FXJC01000029.1 (36713 bp)
Overview 1 RT 1: 23956-29809 bp Neighborhood of RT #1 [23956, 29928] VirB4 RVT-GII HNHc Glucosaminidase Peptidase_M23 Feature: gene Location: 23956-25650 bp Feature: domain Description: VirB4 Location: 24274-24958 bp Feature: domain Description: VirB4 Location: 2 42 74-2 4958 bp Feature: gene Location: 25918-26151 bp Feature: gene Location: 26338-28215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26653-27391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6653-2 7391 bp Feature: domain Description: HNHc Note: nucleases Location: 27949-28102 bp Feature: domain Description: HNHc Note: nucleases Location: 2 7949-2 8102 bp Feature: gene Location: 28403-28723 bp Feature: gene Location: 28723-29928 bp Feature: domain Description: Glucosaminidase Location: 28999-29395 bp Feature: domain Description: Glucosaminidase Location: 2 8999-2 9395 bp Feature: domain Description: Peptidase_M23 Location: 29572-29809 bp Feature: domain Description: Peptidase_M2 3 Location: 2 9572 -2 9809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FXJC01000057.1 (18229 bp)
Overview 1 RT 1: 2552-8092 bp Neighborhood of RT #1 [2552, 8136] DUF3991 Toprim_2 RVT-GII HNHc PRK07726 COG5340 Feature: gene Location: 2552-3949 bp Feature: domain Description: DUF3991 Location: 2930-3173 bp Feature: domain Description: DUF3 991 Location: 293 0-3 173 bp Feature: domain Description: Toprim_2 Location: 3242-3452 bp Feature: domain Description: Toprim_2 Location: 3 242-3 452 bp Feature: gene Location: 4296-4445 bp Feature: gene Location: 4623-6434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4920-5622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4920-5622 bp Feature: domain Description: HNHc Note: nucleases Location: 6165-6291 bp Feature: domain Description: HNHc Note: nucleases Location: 6165-6291 bp Feature: gene Location: 6651-7469 bp Feature: domain Description: PRK07726 Location: 6657-7443 bp Feature: domain Description: PRK07726 Location: 6657-7443 bp Feature: gene Location: 7543-8136 bp Feature: domain Description: COG5340 Location: 7576-8092 bp Feature: domain Description: COG53 40 Location: 7576-8092 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FXJC01000013.1 (63071 bp)
Overview 1 RT 1: 24097-29924 bp Neighborhood of RT #1 [24097, 29953] VirB4 RVT-GII HNHc CwlT_like Spr Feature: gene Location: 24097-25722 bp Feature: domain Description: VirB4 Location: 24421-25033 bp Feature: domain Description: VirB4 Location: 24 4 21-25033 bp Feature: gene Location: 25990-26223 bp Feature: gene Location: 26410-28287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26725-27463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26725-274 63 bp Feature: domain Description: HNHc Note: nucleases Location: 28021-28174 bp Feature: domain Description: HNHc Note: nucleases Location: 28021-28174 bp Feature: gene Location: 28475-28795 bp Feature: gene Location: 28817-29953 bp Feature: domain Description: CwlT_like Location: 29063-29540 bp Feature: domain Description: CwlT_like Location: 29063-2954 0 bp Feature: domain Description: Spr Location: 29564-29924 bp Feature: domain Description: Spr Location: 29564 -29924 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT