myRT

myRT report for GCA_900179855.1_19789_6_80

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Seq: FXIX01000060.1 (18213 bp)
Overview 1 RT 1: 2544-8084 bp Neighborhood of RT #1 [2544, 8128] DUF3991 Toprim_2 RVT-GII HNHc PRK07726 COG5340 Feature: gene Location: 2544-3941 bp Feature: domain Description: DUF3991 Location: 2922-3165 bp Feature: domain Description: DUF3991 Location: 2922-31 65 bp Feature: domain Description: Toprim_2 Location: 3234-3444 bp Feature: domain Description: Toprim_2 Location: 3234-3444 bp Feature: gene Location: 4288-4437 bp Feature: gene Location: 4615-6426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4912-5614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 491 2-561 4 bp Feature: domain Description: HNHc Note: nucleases Location: 6157-6283 bp Feature: domain Description: HNHc Note: nucleases Location: 61 57-6283 bp Feature: gene Location: 6643-7461 bp Feature: domain Description: PRK07726 Location: 6649-7435 bp Feature: domain Description: PRK07726 Location: 6649-7435 bp Feature: gene Location: 7535-8128 bp Feature: domain Description: COG5340 Location: 7568-8084 bp Feature: domain Description: COG5340 Location: 7568-8084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FXIX01000011.1 (61370 bp)
Overview 1 RT 1: 48618-54471 bp Neighborhood of RT #1 [48618, 54590] VirB4 RVT-GII HNHc Glucosaminidase Peptidase_M23 Feature: gene Location: 48618-50312 bp Feature: domain Description: VirB4 Location: 48936-49620 bp Feature: domain Description: VirB4 Location: 48936-4962 0 bp Feature: gene Location: 50580-50813 bp Feature: gene Location: 51000-52877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51315-52053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51315-52 053 bp Feature: domain Description: HNHc Note: nucleases Location: 52611-52764 bp Feature: domain Description: HNHc Note: nucleases Location: 52 611-52 764 bp Feature: gene Location: 53065-53385 bp Feature: gene Location: 53385-54590 bp Feature: domain Description: Glucosaminidase Location: 53661-54057 bp Feature: domain Description: Glucosaminidase Location: 53661-54057 bp Feature: domain Description: Peptidase_M23 Location: 54234-54471 bp Feature: domain Description: Peptidase_M2 3 Location: 542 34-54471 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FXIX01000108.1 (4689 bp)
Overview 1 RT 1: 103-4655 bp Neighborhood of RT #1 [103, 4687] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 103-1287 bp Feature: domain Description: HTH_XRE Location: 133-277 bp Feature: domain Description: HTH_XRE Location: 13 3 -277 bp Feature: domain Description: Rol_Rep_N Location: 310-574 bp Feature: domain Description: Rol_Rep_N Location: 3 10-574 bp Feature: domain Description: Rep_trans Location: 598-1210 bp Feature: domain Description: Rep_trans Location: 598-1210 bp Feature: gene Location: 2167-4077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2500-3238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2500-3 23 8 bp Feature: domain Description: HNHc Note: nucleases Location: 3793-3958 bp Feature: domain Description: HNHc Note: nucleases Location: 3 793 -3 958 bp Feature: gene Location: 4265-4405 bp Feature: gene Location: 4418-4687 bp Feature: domain Description: ArdA Location: 4436-4655 bp Feature: domain Description: ArdA Location: 443 6-4655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT