myRT

myRT report for GCA_900180025.1_19789_6_78

Download annotations/find similar RTs

Seq: FXJJ01000062.1 (18222 bp)
Overview 1 RT 1: 2555-8095 bp Neighborhood of RT #1 [2555, 8139] DUF3991 Toprim_2 RVT-GII HNHc PRK07726 COG5340 Feature: gene Location: 2555-3952 bp Feature: domain Description: DUF3991 Location: 2933-3176 bp Feature: domain Description: DUF3991 Location: 2933-31 76 bp Feature: domain Description: Toprim_2 Location: 3245-3455 bp Feature: domain Description: Toprim_2 Location: 3245-3455 bp Feature: gene Location: 4299-4448 bp Feature: gene Location: 4626-6437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4923-5625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4923-5625 bp Feature: domain Description: HNHc Note: nucleases Location: 6168-6294 bp Feature: domain Description: HNHc Note: nucleases Location: 61 68-6294 bp Feature: gene Location: 6654-7472 bp Feature: domain Description: PRK07726 Location: 6660-7446 bp Feature: domain Description: PRK07726 Location: 6660-7446 bp Feature: gene Location: 7546-8139 bp Feature: domain Description: COG5340 Location: 7579-8095 bp Feature: domain Description: COG5340 Location: 7579-8095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FXJJ01000029.1 (36509 bp)
Overview 1 RT 1: 23759-29612 bp Neighborhood of RT #1 [23759, 29731] VirB4 RVT-GII HNHc Glucosaminidase Peptidase_M23 Feature: gene Location: 23759-25453 bp Feature: domain Description: VirB4 Location: 24077-24761 bp Feature: domain Description: VirB4 Location: 2 4077-2 4761 bp Feature: gene Location: 25721-25954 bp Feature: gene Location: 26141-28018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26456-27194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6456-2 7194 bp Feature: domain Description: HNHc Note: nucleases Location: 27752-27905 bp Feature: domain Description: HNHc Note: nucleases Location: 2 7752 -2 7905 bp Feature: gene Location: 28206-28526 bp Feature: gene Location: 28526-29731 bp Feature: domain Description: Glucosaminidase Location: 28802-29198 bp Feature: domain Description: Glucosaminidase Location: 2 8802 -2 9198 bp Feature: domain Description: Peptidase_M23 Location: 29375-29612 bp Feature: domain Description: Peptidase_M2 3 Location: 2 9375-2 9612 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FXJJ01000110.1 (4689 bp)
Overview 1 RT 1: 103-4655 bp Neighborhood of RT #1 [103, 4687] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 103-1287 bp Feature: domain Description: HTH_XRE Location: 133-277 bp Feature: domain Description: HTH_XRE Location: 13 3 -277 bp Feature: domain Description: Rol_Rep_N Location: 310-574 bp Feature: domain Description: Rol_Rep_N Location: 3 10-574 bp Feature: domain Description: Rep_trans Location: 598-1210 bp Feature: domain Description: Rep_trans Location: 598-1210 bp Feature: gene Location: 2167-4077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2500-3238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2500-3 23 8 bp Feature: domain Description: HNHc Note: nucleases Location: 3793-3958 bp Feature: domain Description: HNHc Note: nucleases Location: 3 793 -3 958 bp Feature: gene Location: 4265-4405 bp Feature: gene Location: 4418-4687 bp Feature: domain Description: ArdA Location: 4436-4655 bp Feature: domain Description: ArdA Location: 443 6-4655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT