myRT

myRT report for GCA_900180125.1_19952_1_18

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Seq: FXKJ01000059.1 (18242 bp)
Overview 1 RT 1: 2562-8102 bp Neighborhood of RT #1 [2562, 8146] DUF3991 Toprim_2 RVT-GII HNHc PRK07726 COG5340 Feature: gene Location: 2562-3959 bp Feature: domain Description: DUF3991 Location: 2940-3183 bp Feature: domain Description: DUF3991 Location: 2940-31 83 bp Feature: domain Description: Toprim_2 Location: 3252-3462 bp Feature: domain Description: Toprim_2 Location: 3252-3462 bp Feature: gene Location: 4306-4455 bp Feature: gene Location: 4633-6444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4930-5632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4930-5632 bp Feature: domain Description: HNHc Note: nucleases Location: 6175-6301 bp Feature: domain Description: HNHc Note: nucleases Location: 61 75-6301 bp Feature: gene Location: 6661-7479 bp Feature: domain Description: PRK07726 Location: 6667-7453 bp Feature: domain Description: PRK07726 Location: 6667-7453 bp Feature: gene Location: 7553-8146 bp Feature: domain Description: COG5340 Location: 7586-8102 bp Feature: domain Description: COG5340 Location: 7586-81 02 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FXKJ01000030.1 (36494 bp)
Overview 1 RT 1: 23748-29601 bp Neighborhood of RT #1 [23748, 29720] VirB4 RVT-GII HNHc Glucosaminidase Peptidase_M23 Feature: gene Location: 23748-25442 bp Feature: domain Description: VirB4 Location: 24066-24750 bp Feature: domain Description: VirB4 Location: 2 4066-2 4750 bp Feature: gene Location: 25710-25943 bp Feature: gene Location: 26130-28007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26445-27183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6445-2 7183 bp Feature: domain Description: HNHc Note: nucleases Location: 27741-27894 bp Feature: domain Description: HNHc Note: nucleases Location: 2 7741-2 7894 bp Feature: gene Location: 28195-28515 bp Feature: gene Location: 28515-29720 bp Feature: domain Description: Glucosaminidase Location: 28791-29187 bp Feature: domain Description: Glucosaminidase Location: 2 8791-2 9187 bp Feature: domain Description: Peptidase_M23 Location: 29364-29601 bp Feature: domain Description: Peptidase_M2 3 Location: 2 9364-2 9601 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FXKJ01000063.1 (16374 bp)
Overview 1 RT 1: 103-4907 bp Neighborhood of RT #1 [103, 4921] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 103-1287 bp Feature: domain Description: HTH_XRE Location: 133-277 bp Feature: domain Description: HTH_XRE Location: 13 3 -277 bp Feature: domain Description: Rol_Rep_N Location: 310-574 bp Feature: domain Description: Rol_Rep_N Location: 3 10-574 bp Feature: domain Description: Rep_trans Location: 598-1210 bp Feature: domain Description: Rep_trans Location: 598-1210 bp Feature: gene Location: 2167-4077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2500-3238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2500-3 23 8 bp Feature: domain Description: HNHc Note: nucleases Location: 3793-3958 bp Feature: domain Description: HNHc Note: nucleases Location: 3 793 -3 958 bp Feature: gene Location: 4265-4405 bp Feature: gene Location: 4418-4921 bp Feature: domain Description: ArdA Location: 4436-4907 bp Feature: domain Description: ArdA Location: 443 6-4907 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT