myRT

myRT report for GCA_900180385.1_CrypA

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Seq: FXLX01000011.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_11_length_52465_cov_223.432, whole genome shotgun sequence (52465 bp)
Overview 1 RT 1: 49600-52459 bp Neighborhood of RT #1 [49600, 52464] Fib_succ_major Avd_like RVT-DGRs RVT-DGRs Fib_succ_major Feature: gene Location: 49600-49827 bp Feature: domain Description: Fib_succ_major Location: 49621-49792 bp Feature: domain Description: Fib_succ_major Location: 49621 -49792 bp Feature: gene Location: 49941-50300 bp Feature: domain Description: Avd_like Location: 49968-50280 bp Feature: domain Description: Avd_like Location: 49968-50280 bp Feature: gene Location: 50316-50885 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 50346-50619 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 50346-5061 9 bp Feature: gene Location: 50892-51056 bp Feature: gene Location: 51046-51468 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 51232-51460 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 51 232-51 460 bp Feature: gene Location: 51613-52464 bp Feature: domain Description: Fib_succ_major Location: 51907-52459 bp Feature: domain Description: Fib_succ_major Location: 51 907-52459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Fib_succ_major (TIGR02145), Avd_like (cd16376), RVT-DGRs

Seq: FXLX01000048.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_48_length_4343_cov_0.565465, whole genome shotgun sequence (4343 bp)
Overview 1 RT 1: 182-3689 bp Neighborhood of RT #1 [182, 3982] L1-EN RVT-UNC zf-RVT Feature: gene Location: 182-3982 bp Feature: domain Description: L1-EN Location: 230-920 bp Feature: domain Description: L1-EN Location: 2 30-92 0 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1817-2480 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1817-2 480 bp Feature: domain Description: zf-RVT Location: 3515-3689 bp Feature: domain Description: zf-RVT Location: 3515-3689 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-UG11/RVT-GII/RVT-Retrons(RVT-UNC), zf-RVT (pfam13966)

Seq: FXLX01000049.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_49_length_4324_cov_3.3848, whole genome shotgun sequence (4324 bp)
Overview 1 RT 1: 101-3683 bp Neighborhood of RT #1 [101, 4150] GIY-YIG_PLEs RVT-UG10 Feature: gene Location: 101-229 bp Feature: gene Location: 412-588 bp Feature: gene Location: 1097-4150 bp Feature: domain Description: GIY-YIG_PLEs Location: 1511-1772 bp Feature: domain Description: GIY-YIG_PLEs Location: 1511-1772 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 3443-3683 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 3 443 -3 683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIY-YIG_PLEs (cd10442), RVT-UG10

Seq: FXLX01000050.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_50_length_4316_cov_0.389353, whole genome shotgun sequence (4316 bp)
Overview 1 RT 1: 92-2161 bp Neighborhood of RT #1 [92, 2161] RVT-CRISPR-like Feature: gene Location: 92-934 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 194-806 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 194 -806 bp Feature: gene Location: 912-1472 bp Feature: gene Location: 1967-2161 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FXLX01000065.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_65_length_3256_cov_0.673058, whole genome shotgun sequence (3256 bp)
Overview 1 RT 1: 1047-3128 bp Neighborhood of RT #1 [1047, 3253] RVT-CRISPR-like RVT-CRISPR-like Feature: gene Location: 1047-1301 bp Feature: gene Location: 2424-2771 bp Feature: gene Location: 2792-3253 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2816-2918 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2816-2918 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2990-3128 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2990-3128 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FXLX01000074.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_74_length_2847_cov_0.451471, whole genome shotgun sequence (2847 bp)
Overview 1 RT 1: 1-2329 bp Neighborhood of RT #1 [1, 2340] RVT-UNC GIY-YIG_PLEs Feature: gene Location: 1-2340 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 922-1411 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 922-1411 bp Feature: domain Description: GIY-YIG_PLEs Location: 2050-2329 bp Feature: domain Description: GIY-YIG_PLEs Location: 2050-2329 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII/RVT-UG19/RVT-CRISPR/RVT-DGRs(RVT-UNC), GIY-YIG_PLEs (cd10442)

Seq: FXLX01000094.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_94_length_2400_cov_0.186978, whole genome shotgun sequence (2400 bp)
Overview 1 RT 1: 1-2288 bp Neighborhood of RT #1 [1, 2288] RVT-UNC Feature: gene Location: 1-426 bp Feature: gene Location: 461-1453 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 695-1334 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 695-1334 bp Feature: gene Location: 1566-2288 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: FXLX01000101.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_101_length_2174_cov_0.222277, whole genome shotgun sequence (2174 bp)
Overview 1 RT 1: 89-1435 bp Neighborhood of RT #1 [89, 1435] RVT-GII Feature: gene Location: 89-394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125-368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125-368 bp Feature: gene Location: 698-925 bp Feature: gene Location: 1283-1435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FXLX01000106.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_106_length_2097_cov_0.184264, whole genome shotgun sequence (2097 bp)
Overview 1 RT 1: 1-849 bp Neighborhood of RT #1 [1, 1799] RVT-UNC Feature: gene Location: 1-246 bp Feature: gene Location: 264-1799 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 417-849 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 417-849 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiA/RVT-CRISPR/RVT-GII(RVT-UNC)

Seq: FXLX01000113.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_113_length_2021_cov_0.271383, whole genome shotgun sequence (2021 bp)
Overview 1 RT 1: 360-1893 bp Neighborhood of RT #1 [360, 2018] RVT-UNC GIY-YIG_PLEs Feature: gene Location: 360-2018 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 627-1083 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 627-10 83 bp Feature: domain Description: GIY-YIG_PLEs Location: 1755-1893 bp Feature: domain Description: GIY-YIG_PLEs Location: 1755-1893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG9/RVT-GII/RVT-DGRs/RVT-UG10(RVT-UNC), GIY-YIG_PLEs (cd10442)

Seq: FXLX01000118.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_118_length_1981_cov_0.159115, whole genome shotgun sequence (1981 bp)
Overview 1 RT 1: 249-1119 bp Neighborhood of RT #1 [249, 1778] RVT-CRISPR-like Feature: gene Location: 249-1778 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 492-1119 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 492-11 19 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FXLX01000122.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_123_length_1917_cov_0.341914, whole genome shotgun sequence (1917 bp)
Overview 1 RT 1: 192-1267 bp Neighborhood of RT #1 [192, 1914] RVT-UNC Feature: gene Location: 192-398 bp Feature: gene Location: 493-1914 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 643-1267 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 643-12 67 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: FXLX01000130.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_133_length_1859_cov_0.562933, whole genome shotgun sequence (1859 bp)
Overview 1 RT 1: 354-1050 bp Neighborhood of RT #1 [354, 1856] RVT-CRISPR-like Feature: gene Location: 354-1856 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 549-1050 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 549-1050 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FXLX01000131.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_131_length_1859_cov_0.0894403, whole genome shotgun sequence (1859 bp)
Overview 1 RT 1: 692-1665 bp Neighborhood of RT #1 [692, 1856] RVT-UNC Feature: gene Location: 692-826 bp Feature: gene Location: 1068-1856 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1092-1665 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1092-1665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII/RVT-CRISPR/RVT-UG26(RVT-UNC)

Seq: FXLX01000152.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_153_length_1704_cov_0.289157, whole genome shotgun sequence (1704 bp)
Overview 1 RT 1: 1-588 bp Neighborhood of RT #1 [1, 1703] RVT-CRISPR-like Feature: gene Location: 1-165 bp Feature: gene Location: 336-1703 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 438-588 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 438-588 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FXLX01000160.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_160_length_1668_cov_0.336794, whole genome shotgun sequence (1668 bp)
Overview 1 RT 1: 228-1572 bp Neighborhood of RT #1 [228, 1583] RVT-UNC GIY-YIG_PLEs Feature: gene Location: 228-1583 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 330-636 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 330-636 bp Feature: domain Description: GIY-YIG_PLEs Location: 1296-1572 bp Feature: domain Description: GIY-YIG_PLEs Location: 1296-1572 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs/RVT-GII/RVT-CRISPR/RVT-UG26(RVT-UNC), GIY-YIG_PLEs (cd10442)

Seq: FXLX01000161.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_161_length_1655_cov_0.169503, whole genome shotgun sequence (1655 bp)
Overview 1 RT 1: 1-1644 bp Neighborhood of RT #1 [1, 1652] RVT-UG27 Feature: gene Location: 1-804 bp Feature: gene Location: 764-1003 bp Feature: gene Location: 1089-1652 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 1110-1644 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 1110-1644 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: FXLX01000179.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_178_length_1543_cov_0.185028, whole genome shotgun sequence (1543 bp)
Overview 1 RT 1: 3-813 bp Neighborhood of RT #1 [3, 1514] RVT-CRISPR-like Feature: gene Location: 3-1514 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 204-813 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 204-813 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FXLX01000184.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_184_length_1512_cov_0.202166, whole genome shotgun sequence (1512 bp)
Overview 1 RT 1: 295-622 bp Neighborhood of RT #1 [295, 1269] RVT-CRISPR-like Feature: gene Location: 295-1269 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 358-622 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 358-622 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FXLX01000187.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_187_length_1505_cov_0.187954, whole genome shotgun sequence (1505 bp)
Overview 1 RT 1: 205-649 bp Neighborhood of RT #1 [205, 1317] RVT-CRISPR-like Feature: gene Location: 205-1317 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 241-649 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 241-649 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FXLX01000197.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_197_length_1441_cov_0.221293, whole genome shotgun sequence (1441 bp)
Overview 1 RT 1: 370-610 bp Neighborhood of RT #1 [370, 1377] RVT-CRISPR-like Feature: gene Location: 370-1377 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 415-610 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 415-610 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FXLX01000199.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_199_length_1418_cov_0.0549961, whole genome shotgun sequence (1418 bp)
Overview 1 RT 1: 6-1113 bp Neighborhood of RT #1 [6, 1238] RVT-UNC Feature: gene Location: 6-1238 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 864-1113 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 864-1113 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG19/RVT-UG10/RVT-DGRs/RVT-UG25(RVT-UNC)

Seq: FXLX01000211.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_211_length_1369_cov_0.223833, whole genome shotgun sequence (1369 bp)
Overview 1 RT 1: 27-696 bp Neighborhood of RT #1 [27, 1367] RVT-UNC Feature: gene Location: 27-1367 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 84-696 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 84-696 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: FXLX01000235.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_236_length_1275_cov_0.204704, whole genome shotgun sequence (1275 bp)
Overview 1 RT 1: 686-1184 bp Neighborhood of RT #1 [686, 1273] RVT-CRISPR-like Feature: gene Location: 686-1273 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 770-1184 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 770-1184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FXLX01000248.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_248_length_1212_cov_0.305069, whole genome shotgun sequence (1212 bp)
Overview 1 RT 1: 52-1034 bp Neighborhood of RT #1 [52, 1210] RVT-CRISPR-like Feature: gene Location: 52-396 bp Feature: gene Location: 485-1210 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 509-1034 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 509-1034 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FXLX01000294.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_294_length_1085_cov_0.155532, whole genome shotgun sequence (1085 bp)
Overview 1 RT 1: 2-1075 bp Neighborhood of RT #1 [2, 1083] RVT-CRISPR-like Feature: gene Location: 2-601 bp Feature: gene Location: 613-1083 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 655-1075 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 655-1075 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FXLX01000316.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_316_length_1035_cov_0.309471, whole genome shotgun sequence (1035 bp)
Overview 1 RT 1: 3-1032 bp Neighborhood of RT #1 [3, 1032] RVT-UNC Feature: gene Location: 3-695 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 177-618 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 177-618 bp Feature: gene Location: 904-1032 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2/RVT-CRISPR/RVT-GII(RVT-UNC)

Seq: FXLX01000337.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_339_length_957_cov_0.155609, whole genome shotgun sequence (957 bp)
Overview 1 RT 1: 127-796 bp Neighborhood of RT #1 [127, 954] RVT-CRISPR-like Feature: gene Location: 127-954 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 478-796 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 478-796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: FXLX01000351.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_351_length_932_cov_0.196273, whole genome shotgun sequence (932 bp)
Overview 1 RT 1: 30-847 bp Neighborhood of RT #1 [30, 930] RVT-CRISPR-like RVT-DGRs Feature: gene Location: 30-497 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 147-414 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 147-414 bp Feature: gene Location: 427-930 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 613-847 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 613-847 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, RVT-DGRs

Seq: FXLX01000440.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_441_length_820_cov_0.049062, whole genome shotgun sequence (820 bp)
Overview 1 RT 1: 3-381 bp Neighborhood of RT #1 [3, 818] RVT-CRISPR-like RT_nLTR_like Feature: gene Location: 3-140 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 48-129 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 48-129 bp Feature: gene Location: 162-818 bp Feature: domain Description: RT_nLTR_like Location: 189-381 bp Feature: domain Description: RT_nLTR_like Location: 189-381 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, RT_nLTR_like (cd01650)

Seq: FXLX01000455.1 uncultured SUP05 cluster bacterium isolate CRYPA genome assembly, contig: NODE_455_length_800_cov_0.212481, whole genome shotgun sequence (800 bp)
Overview 1 RT 1: 1-361 bp Neighborhood of RT #1 [1, 798] RVT-CRISPR-like Feature: gene Location: 1-798 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 22-361 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 22-361 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR