myRT

myRT report for GCA_900180535.1_14936_3_74

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Seq: FXMD01000012.1 (153481 bp)
Overview 1 RT 1: 112845-119713 bp Neighborhood of RT #1 [112845, 119715] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112845-113573 bp Feature: domain Description: FimC Location: 112893-113556 bp Feature: domain Description: FimC Location: 1 1 2893-1 1 3556 bp Feature: gene Location: 113605-116214 bp Feature: domain Description: FimD Location: 113662-116203 bp Feature: domain Description: FimD Location: 1 1 3662-1 1 6203 bp Feature: gene Location: 116214-118292 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116622-117066 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 6622-1 1 7066 bp Feature: gene Location: 118349-118789 bp Feature: domain Description: Integrase_1 Location: 118355-118571 bp Feature: domain Description: Integrase_1 Location: 1 1 8355-1 1 8571 bp Feature: gene Location: 119050-119715 bp Feature: domain Description: INT_P4_C Location: 119155-119713 bp Feature: domain Description: INT_P4_C Location: 1 1 91 55-1 1 971 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: FXMD01000028.1 (66793 bp)
Overview 1 RT 1: 6601-10791 bp Neighborhood of RT #1 [6601, 10791] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 6601-7272 bp Feature: domain Description: Plasmid_stab_B Location: 6616-6823 bp Feature: domain Description: Plasmid_stab_B Location: 6616-682 3 bp Feature: domain Description: Plasmid_stab_B Location: 6928-7135 bp Feature: domain Description: Plasmid_stab_B Location: 692 8-7135 bp Feature: gene Location: 7275-8249 bp Feature: domain Description: StbA Location: 7281-8226 bp Feature: domain Description: StbA Location: 72 81-82 2 6 bp Feature: gene Location: 8495-9982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8900-9590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8900-9590 bp Feature: gene Location: 10033-10266 bp Feature: gene Location: 10396-10791 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII

Seq: FXMD01000065.1 (1892 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII