myRT

myRT report for GCA_900180555.1_14936_3_85

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Seq: FXNN01000023.1 (89308 bp)
Overview 1 RT 1: 87164-88858 bp Neighborhood of RT #1 [87164, 89250] RVT-GII Feature: gene Location: 87164-87310 bp Feature: gene Location: 87313-87609 bp Feature: gene Location: 87763-89250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88168-88858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 881 68-88858 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FXNN01000039.1 (30515 bp)
Overview 1 RT 1: 12055-16138 bp Neighborhood of RT #1 [12055, 16275] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 12055-12486 bp Feature: domain Description: PRK10276 Location: 12106-12469 bp Feature: domain Description: PRK102 76 Location: 12 106-12 469 bp Feature: gene Location: 12610-12843 bp Feature: gene Location: 12894-14381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13299-13989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 99-13989 bp Feature: gene Location: 14627-15601 bp Feature: domain Description: StbA Location: 14633-15578 bp Feature: domain Description: StbA Location: 14633-15578 bp Feature: gene Location: 15604-16275 bp Feature: domain Description: Plasmid_stab_B Location: 15619-15826 bp Feature: domain Description: Plasmid_stab_B Location: 15619-1582 6 bp Feature: domain Description: Plasmid_stab_B Location: 15931-16138 bp Feature: domain Description: Plasmid_stab_B Location: 15931-16138 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: FXNN01000013.1 (151836 bp)
Overview 1 RT 1: 32144-38997 bp Neighborhood of RT #1 [32144, 39014] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32144-32809 bp Feature: domain Description: INT_P4_C Location: 32249-32807 bp Feature: domain Description: INT_P4_C Location: 3 2249-3 2807 bp Feature: gene Location: 33070-33510 bp Feature: domain Description: Integrase_1 Location: 33076-33292 bp Feature: domain Description: Integrase_1 Location: 3 3 076-3 3 292 bp Feature: gene Location: 33567-35645 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33975-34419 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 3 975-3 4419 bp Feature: gene Location: 35645-38254 bp Feature: domain Description: FimD Location: 35702-38243 bp Feature: domain Description: FimD Location: 3 5702-3 8243 bp Feature: gene Location: 38286-39014 bp Feature: domain Description: FimC Location: 38334-38997 bp Feature: domain Description: FimC Location: 3 83 3 4-3 8997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)